Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1459 ATGGTGCACAGCGCCTACGATTCTTGCGAACTCATCGACAATTGCTCTTCTAAGATAGAAGCTATCGAATCTTACGGCGCAAAGCTCCTCCTGGGCTGCTCCGATGGATCCCTTCGAATATACGCTCCAGAATCATCCGATTCCGATCGGTCTCCGCCGGCCGATCATCACGCACAGGAGCTGCGGAAGGAAGCCTACGTGCTTGAAAGAAACTTGGCTGGCTTTTCGAGAAAGCCTGTGGTGTCAATGGAGGTCTCGGAATCTAGGGAGCTACTTCTATCACTTTCCGAATCTATTTCGTTTCACGGTCTTCCCAATTTTGAAACCATAGCAGTCATCACGAAGGCCAAGGGCGCCAATGTATTCTGCTGGGATGACCGAAGAGGTTTCTTATGCTTCGCGAGGCAAAAGAGGGTTTGTATTTTCAGGCACGACGGTGGTAGAGGATTTGTGGAGGTGAAAGACTTTGGTGTTCCAGACGTGGTGAAGTCGATGTCTTGGTGTGGCGAAAATATATGTTTGGGGATCAAAAGAGAATATGTAATACTGAATGCTATAAATGGTGCTTTGTCTGAGGTATTTACTTCTGGGAGACTAGCGCCGCCTTTAGTGGTCTCTCTCCCTTCTGGAGAGCTTCTTCTTGGAAAGGAGAACATTGGGGTCTTTGTGGATCAAAATGGGAAACTTCTTCCAGAAGGCAGGATTTGTTGGTCAGAGGCCCCTGCAGAAGTTGTAATTCAGAAACCATATGGTATAGCTCTGCTGCCTAGATTTGTGGAGATTCGATCTCTCCGAGATCCATATCCCCTGATACAGACTGTTGTTCTTCGAAATGTTCGTCATCTTCGGCAAAACAACAATTCTGTGCTACTTGTAGTAGATAATTCTGTTCATGGCCTCTTCTCTGTTCCTCTTGGAGCCCAGATTGTCCAATTAACGGCATCTGGCAACTTTGAAGAAGCTTTGTCATTGTGCAAACTACTTCCACTTGAAGATTCAAATCTTCGTGCTGCAAAGGAGGGTTCGATCCATATAAGATATGCCCACTATCTTTTTGACAATGGGAGCTATGAGGAGGCAATGGAACATTTTCTGGCATCTCAAGTAGATATAACTTATGTACTTTCTCTGTATCCTTCTATTGTCCTTCCAAAGACAACTATTATTCATGAGCCGGAGAAGTTGGTGGACATTTCTTGGGATGCTTCATATCTCTCCAGAGGTTCTTCAGGTCTGTCCGATGATATGGAACCCTCGCCGCCGCCACATATGTCAGAATCTGATGAGAGTGCAGCACTTGAATCCAAAAAGATGAGTCATAATATGCTTATGGCTCTCATTAAGTTTTTGCAGAAGAAGAGATATAGCATTATTGAAAAGGCCACTGCTGAGGGAACTGAGGAGGTCGTTTTAGATGCAGTTGGGGATAACTTAGCATCCTATAACAGTAGTAGGTTTAAGAAAATAAACAAGGGGCGTGGTAATGTTCCTGTTAGCTCAGGAGCTCGGGAGATGGCTTCAATATTGGATACTGCACTTCTCCAGGCGTTGCTTCTCACTGGACAATCTTCCTTGGCTTTAGAATTGCTGAGAGGTCTTAACTACTGTGATTTGAAGATATGCGAAGAGATGCTTCGAAAAGGCAATAATAATGTTGCTTTATTAGAACTTTACAAGTGCAATTCAATGCACCGGGAAGCTCTTGAGCTTGTTCACCAATTGGTGGAACAGTCAAAGTCAACCCCATCTGAGGTTACACATAGGTTCAAGCCTGAGGCAATTATTGAATATCTCAAGCCTCTGTGTGGGTCAGACCCCATGCTTGTTCTGGAGTTCTCAATGCTTGTTCTTGAAAGTTGTCCAACACAAACTATTGAGCTCTTTCTGTCTGGAAATATTCCAGCAGATATGGTGAATTCGTATTTGAAGAAACATTCTCCAAACATGCAGGCTACTTACTTGGAACTCATGCTTGCAATGAACGAGGGTGCCATCTCCAGAAATTTGCAAAATGAAATGGTAAACATCTATCTTTCCGAAGTACTTGAATGGCATGCAGATTTAAGGGCTCAACAGAAATGGGATGAGAAAGCTTATTCCCCAACAAGGAAGAAATTATTGTCTGCTTTAGAGAGTATATCAGGATACAGTCCAGAAGCTCTATTGAAACGTCTTCCAACAGATGCTTTATATGAAGAGCGTGCAATATTGTTGGGAAAAATAAACCAACATGAATTGGCACTGTCTTTATATGTTCGTAAGCTTCATGTTCCAGAATTGGCGCTGTCTTATTGTGACCGGGTGTATGATTCTACACATCAGCCATCTGTAAAATCTTCCAGCAACATATACCTAACTCTTCTGCAAATCTATTTAAATCCACAAAGGACAACCAAGAGCTTTGAAAAGAGAATCACGAGTCTATCATCCCCCCAGAATATAAGTGTTTCAAAGGTTGGCTCCTTGACATCGGTAAAATCTAAAGGAGGCAGAGGAAGTAAGAAAATTGCTGCAATAGAGGGTGCGGAGGACACAAAAGTTAATTTTAGCAGCACTGACAGTAGCCGGAGTGATGGTGATCTGGATGAATTTAGTGAGGAAAGTGGTACTACTATCATGCTTGATGAGGTCCTTGATTTGTTGAGCTGCAGATGGGATAGAATAAATGGAGCTCAGGCACTTAAAATTTTACCAAGAGAGACTAAACTACAGAACTTGCTTCCATTTCTTGGACCTCTTCTGCGAAAATCTAGTGAAATGTACCGTAATTACTCAGTGATCAAGAGCTTGAGACAGAGTGAGAACCTTCAGGTGAAAGATGAACTCTACGATCAGAGGAAAGCAGTTGTGAAGATAACCAGTGACAGCATGTGTTCCCTTTGCCATAAGAAGATAGGTACAAGTGTATTTGCAGTCTACCCCAATGGGAAAACCCTTGTGCACTTTGTCTGTTTCAGAGATTCTCAGAGCATGAAAGCTGTGGCCAAAGGGTCGCCATTGAGGAAATGA 3009 0.4317 MVHSAYDSCELIDNCSSKIEAIESYGAKLLLGCSDGSLRIYAPESSDSDRSPPADHHAQELRKEAYVLERNLAGFSRKPVVSMEVSESRELLLSLSESISFHGLPNFETIAVITKAKGANVFCWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKDFGVPDVVKSMSWCGENICLGIKREYVILNAINGALSEVFTSGRLAPPLVVSLPSGELLLGKENIGVFVDQNGKLLPEGRICWSEAPAEVVIQKPYGIALLPRFVEIRSLRDPYPLIQTVVLRNVRHLRQNNNSVLLVVDNSVHGLFSVPLGAQIVQLTASGNFEEALSLCKLLPLEDSNLRAAKEGSIHIRYAHYLFDNGSYEEAMEHFLASQVDITYVLSLYPSIVLPKTTIIHEPEKLVDISWDASYLSRGSSGLSDDMEPSPPPHMSESDESAALESKKMSHNMLMALIKFLQKKRYSIIEKATAEGTEEVVLDAVGDNLASYNSSRFKKINKGRGNVPVSSGAREMASILDTALLQALLLTGQSSLALELLRGLNYCDLKICEEMLRKGNNNVALLELYKCNSMHREALELVHQLVEQSKSTPSEVTHRFKPEAIIEYLKPLCGSDPMLVLEFSMLVLESCPTQTIELFLSGNIPADMVNSYLKKHSPNMQATYLELMLAMNEGAISRNLQNEMVNIYLSEVLEWHADLRAQQKWDEKAYSPTRKKLLSALESISGYSPEALLKRLPTDALYEERAILLGKINQHELALSLYVRKLHVPELALSYCDRVYDSTHQPSVKSSSNIYLTLLQIYLNPQRTTKSFEKRITSLSSPQNISVSKVGSLTSVKSKGGRGSKKIAAIEGAEDTKVNFSSTDSSRSDGDLDEFSEESGTTIMLDEVLDLLSCRWDRINGAQALKILPRETKLQNLLPFLGPLLRKSSEMYRNYSVIKSLRQSENLQVKDELYDQRKAVVKITSDSMCSLCHKKIGTSVFAVYPNGKTLVHFVCFRDSQSMKAVAKGSPLRK 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1459 1002 MobiDBLite consensus disorder prediction 410 432 - -
Glsi05g1459 1002 Pfam CNH domain 27 282 IPR001180 -
Glsi05g1459 1002 ProSiteProfiles Citron homology (CNH) domain profile. 16 289 IPR001180 -
Glsi05g1459 1002 Pfam Vacuolar sorting protein 39 domain 1 509 617 IPR019452 -
Glsi05g1459 1002 SUPERFAMILY WD40 repeat-like 26 175 IPR036322 GO:0005515
Glsi05g1459 1002 PANTHER CNH DOMAIN CONTAINING 1 991 IPR032914 GO:0016192
Glsi05g1459 1002 Pfam Vacuolar sorting protein 39 domain 2 878 986 IPR019453 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1459 Glsi-ChrGlsi05 63265626 63273539 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1459 05 63265626 63273539 Glsi05g1459 05 63265626 63273539 ECH