Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1454 ATGGGTCTTCTCAGTATCATTCGGAAAATTAAAAGGAAAGAGAAGGAAATGCGCATTCTCATGGTTGGCCTGGATAATTCTGGGAAAACTACGATTGTTTTGAAGATTAATGGGGAGGACACTAGCATCATTAGTCCTACACTTGGTTTCAACATCAAAACCATCACCTATCAAAAGTATACTCTCAATATATGGGATATTGGGGGCCAAAAAACAATAAGATCTTACTGGAGAAACTACTTTGAGCAGACAGATGGTTTGGTTTGGGTAGTTGACAGTTCAGATCTGAGAAGGTTGGATGATTGCAAAATGGAGCTAGATAACCTTTTGAAGGAAGAGAGGCTATCTGGATCATCCTTACTGATACTTGCAAATAAGCAGGACATAAAAGGTGCCCTTACACCAGTAGATATAGCTAAGGTGCTGAACTTGGAAACTATGGATAAATCACGGCACTGGAAGATAGTTGGCTGTAGTGCATATACTGGAGAGGGTCTGCTTGAGGGATTTAATTGGTTGGTCCAGGACATCGCCTCTAGAATCTACATGCTTGATTAA 558 0.405 MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSIISPTLGFNIKTITYQKYTLNIWDIGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGSSLLILANKQDIKGALTPVDIAKVLNLETMDKSRHWKIVGCSAYTGEGLLEGFNWLVQDIASRIYMLD 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1454 185 NCBIfam small GTP-binding protein domain 15 149 IPR005225 GO:0005525
Glsi05g1454 185 ProSiteProfiles small GTPase Arf family profile. 10 177 - -
Glsi05g1454 185 FunFam ADP-ribosylation factor-like 2, arl2 4 182 - -
Glsi05g1454 185 Pfam ADP-ribosylation factor family 4 177 IPR006689 GO:0003924|GO:0005525
Glsi05g1454 185 SMART sar_sub_1 3 177 IPR006689 GO:0003924|GO:0005525
Glsi05g1454 185 PANTHER ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-RELATED 1 177 IPR044612 GO:0003924
Glsi05g1454 185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 179 IPR027417 -
Glsi05g1454 185 SMART arf_sub_2 1 181 - -
Glsi05g1454 185 Gene3D - 5 182 IPR027417 -
Glsi05g1454 185 PRINTS GTP-binding SAR1 protein signature 73 98 IPR006689 GO:0003924|GO:0005525
Glsi05g1454 185 PRINTS GTP-binding SAR1 protein signature 18 41 IPR006689 GO:0003924|GO:0005525
Glsi05g1454 185 PRINTS GTP-binding SAR1 protein signature 46 70 IPR006689 GO:0003924|GO:0005525
Glsi05g1454 185 PRINTS GTP-binding SAR1 protein signature 151 175 IPR006689 GO:0003924|GO:0005525
Glsi05g1454 185 SMART rab_sub_5 17 180 - -
Glsi05g1454 185 CDD Arl2 3 176 IPR045873 GO:0003924
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1454 Glsi-ChrGlsi05 63244486 63246792 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1454 05 63244486 63246792 Glsi05g1454 05 63244486 63246792 ECH