Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1452 ATGAAAACGATGGACGAAGCTACATTTATGGACTCTATGGACTTGAAGGTGAGGGAGCTGTTGAAAGAGGTCCAGTTAGACTGCTCTCCTCAATTCACCAAACTCGTTGATGACACAGTCTCCGGCATTAAAGCATCCATCGATAAAATCCCCGAAGATTTTAAGGTCACGGCAGATATAGCTCCAAATTTTGTAAGGGAAATCGGTGCGGATAAAGTGGAGTTTAACTTTAAGAAGCCAAAGTCTATTAAAATCGGGGGCAGTTATCCCACACAATGTCTTGCAAAGCCTGAAGTAAATGTGGATCTTATTATTAGGTTGCCAAAGGAGTGTTTTCATGAAAAAGATTATTTAAATTACAGATATCATGCAAAGAGGTGCCTATATCTCTGCTTGGTGAAGAAGTACTTGGATACTTCTCCATCTTTTGATAAGGTTGAATGGTCTACACTACAAAATGAAGCCCGAAAACCTGTACTAATTGTTTATCCAGCTGCAAAGATTGACGAAGTTCCTGGTGTTTTTGTAAGAATAATTCCATCAGCAATGTCTCTATTTAACATATCAAAGTTGAACCTGAACCGTAATAACATCCATGCTCCAAGTCAAGGGACTGCTCTTCAAGCTACGCCAAAATACAATAGTAGTATTTTGGAAGACATGTTTTTAGAGGATACAGAATTCATCGACAAAAGTTTTCTTGGATGGAAGGAACTAAGAGAGGCTTCAATTCTGCTTAAGGTTTGGGCTCGGCAGAGAAGTTCAATATACGTTCATGATTGCCTAAATGGATTTTTAATATCCGTCATACTGGCATACCTTTTGACCAAGCAACAAATTAACAAATCAATGAAGGTGATCCAAATAATTCGTGTTACCATGAATTTCATTGCCACTTCAGAGTTGTGGAGCCGGGGGCTCTACTTTCCTCAGGAAGGCCAGAGCAATATTGCGAAAGAGGAAAGGATTCTATTTAAAAAGTCATTTCCAGTTGTCGTATGCAATCCATCTGGAAAGTTCAATTTGGCATTCCGGATTTCTAGGATTGGTTTTACTCAGCTTAAAGATGAGGCTGCTTTGACACTTAAATGCTTGGAGAAGTGTAGAGACGGTGGATTTGAGGAAATATTTATGACCAAGATTGACTATGCTGCTAAATATGACTATTGCATGAGAATAAATTTGAAGGGAAACAAGGAAGTATATGGGTTGGGATTTTGTTCGGATGATGAGTGCTGGAGATCTTATGAGGAGAAAGTACATGGTATTCTAACTAAAGGGTTGGATGATAGAGCAAAGTTCATTCGTGTTATCTGGAGAAATACACAGTCCCAATGGAGTGTAGATGATGGCTTGTCTGTACTAGATAAACAACCTTTATTTATAGGAATTTCAGTGAGTACTTTGGAGAAAGCATTTAGGATGGTTGATATCGGCCCAAATGCTGATAATAAAGAAGAGGCTCTGGAATTCCGGAAGTTTTGGGGGGCAAGAGCAGAGCTTAGGAGATTTAAAGATGGTAGAATTGCAGAAAGCACAGTTTGGGAAAGTGAGCAGTGGACAAGACACCTTGTTTTAAAAAGAATAGCCGAGCATGTACTTAGTCAACATCTTTCTCTGTCGAAAGACAACATTGTAGTTGCAGTGGATCAACTTGATTTCTCTTTGCTTCATGGAGCTGGAGATCCTATATCATATTCTGGAAGTTTGCTTGGGGCATTTGATGTCTTATCAAAGCGCTTGCGTCTTATTCAAGACATCCCTTTGAAGGTGTCTAGTGTACAGCCTTTAGACTCAGCTTTCAGGTTTACATCCGTCTTCCCTCCCGAGCCTCATCTTCTGGCTAATGAAAAAATTGAACCTTGTAGACTAAATAATTCCATTCCATCTTGCATTCAATCACTGGAAGTTATGATTCAGCTGGAAGGTTCTGGGAACTGGCCAATGGATGAAATTGCAATTGAAAAAACGAAATCTGCTTTCCTGCTTCAGATCGGAGAGAGTCTTCAAAAGATTTGGGGGATGACATGTGTTGCAACTGAGGATGATGTGGATGTATTAATATCTGGATATGCATTTCGTCTTAAAATTTTGCACGAGAGGGGCCTCAGTTTGCTCAAAAAGGAAAGTGAACATGATCAAGCAAAGCGTGTTTCTTCTACGGACAAGAAACTTTTCATCCATAGTCAGCATGCTAGCATGATTAATGGATTACAAAGTCGTCACCCAATATATGGACCAGTAGTTAGACTTGCAAAACGATGGGCTGCTTCCCATCTATTTTCAGCTTGCTTGGGAGAGGAAGCAGTTGAGCTTTTGGTTGCATATCTCTTTCTTAATCCTTTGCCATTTGATACTCCTTGCTCACGGATAACTGGATTTTTAAGGTTCCTGCGGTTACTCTCAGAGTATGATTGGACTTTCTCTTCATTGGTTGTTGACATAAATAATGACTTAAGCCGAAGTGATGAGAAAGAGATAAGTGACAACTTTTTGTTAAGCAGAAAGGGTCAGGGAGAGAATGGACAAACTGTAAGGCCAGCTATGTTCTTAGCTACAGTTTACGATAAAGCATCTGAGGCTTGGACTGGATTATCACCAAGTGCATTGGAACTTAAAAGGCTGGTGGCTTATGCCCGTAGTAGTGCAAACTTGTTGACCAAACTTATATTTCAGGACCAGATTGGTCCATACAAATGGGAGTGCCTTTTTCGAACTCCTTTGAACAATTATGATGCCATAATTCTTCTCCACAGAGACAGACTCCCTTATCCCCAAAGACTTCTCTTCCCGTCAGAAGTTGATCATGGAAAACATGTCGCTAGAGGACATGCTAGCAAGTGTTTCCAACCCTTCCTTTTGCCTAGAGATTTGAAGGGGACCCCTGAGGAAGTTAAAAATAAGTTGCTGGTAGACTTTGATCCATTAAGGTGCTTTATCAGGGATTTAGAGAAAGAGTTCACCACATTCAAGGTATGGCATGATTTGCTGGGAGGTGATGTTATTGGCCTAACGTGGGGGGAGACTTATTCTTCAAAGAAACGGAAGCAAGAGGAAGTAGTTGAGGAACGACAAGACCCAAGGAAGGTGTTAAAATCAGTGGGCGAAGTTGGGAAAGGGTTTGTGAGGAGTATTTACTTTCTCAAGCCCCCAAATCCCTCGAATTGA 3168 0.405 MKTMDEATFMDSMDLKVRELLKEVQLDCSPQFTKLVDDTVSGIKASIDKIPEDFKVTADIAPNFVREIGADKVEFNFKKPKSIKIGGSYPTQCLAKPEVNVDLIIRLPKECFHEKDYLNYRYHAKRCLYLCLVKKYLDTSPSFDKVEWSTLQNEARKPVLIVYPAAKIDEVPGVFVRIIPSAMSLFNISKLNLNRNNIHAPSQGTALQATPKYNSSILEDMFLEDTEFIDKSFLGWKELREASILLKVWARQRSSIYVHDCLNGFLISVILAYLLTKQQINKSMKVIQIIRVTMNFIATSELWSRGLYFPQEGQSNIAKEERILFKKSFPVVVCNPSGKFNLAFRISRIGFTQLKDEAALTLKCLEKCRDGGFEEIFMTKIDYAAKYDYCMRINLKGNKEVYGLGFCSDDECWRSYEEKVHGILTKGLDDRAKFIRVIWRNTQSQWSVDDGLSVLDKQPLFIGISVSTLEKAFRMVDIGPNADNKEEALEFRKFWGARAELRRFKDGRIAESTVWESEQWTRHLVLKRIAEHVLSQHLSLSKDNIVVAVDQLDFSLLHGAGDPISYSGSLLGAFDVLSKRLRLIQDIPLKVSSVQPLDSAFRFTSVFPPEPHLLANEKIEPCRLNNSIPSCIQSLEVMIQLEGSGNWPMDEIAIEKTKSAFLLQIGESLQKIWGMTCVATEDDVDVLISGYAFRLKILHERGLSLLKKESEHDQAKRVSSTDKKLFIHSQHASMINGLQSRHPIYGPVVRLAKRWAASHLFSACLGEEAVELLVAYLFLNPLPFDTPCSRITGFLRFLRLLSEYDWTFSSLVVDINNDLSRSDEKEISDNFLLSRKGQGENGQTVRPAMFLATVYDKASEAWTGLSPSALELKRLVAYARSSANLLTKLIFQDQIGPYKWECLFRTPLNNYDAIILLHRDRLPYPQRLLFPSEVDHGKHVARGHASKCFQPFLLPRDLKGTPEEVKNKLLVDFDPLRCFIRDLEKEFTTFKVWHDLLGGDVIGLTWGETYSSKKRKQEEVVEERQDPRKVLKSVGEVGKGFVRSIYFLKPPNPSN 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1452 1055 Pfam Nrap protein domain 3 385 538 IPR035368 -
Glsi05g1452 1055 Gene3D - 219 383 - -
Glsi05g1452 1055 Pfam Nrap protein domain 1 101 225 IPR035082 -
Glsi05g1452 1055 Pfam Nrap protein PAP/OAS-like domain 239 380 IPR035367 -
Glsi05g1452 1055 Pfam Nrap protein domain 6 908 1045 IPR035371 -
Glsi05g1452 1055 FunFam Nucleolar protein 6 213 383 - -
Glsi05g1452 1055 Pfam Nrap protein PAP/OAS1-like domain 5 742 894 IPR035370 -
Glsi05g1452 1055 Pfam Nrap protein nucleotidyltransferase domain 4 567 739 IPR035369 -
Glsi05g1452 1055 PANTHER NUCLEOLAR RNA-ASSOCIATED PROTEIN 6 1046 IPR005554 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1452 Glsi-ChrGlsi05 63224662 63236104 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1452 05 63224662 63236104 Glsi05g1452 05 63224662 63236104 ECH