Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1440 ATGGCTGCCGCAAGATTATCGTCATGCGTAGCCATGGCAGCAGCGGTGGCTTCCATTTCCACGCTCTCCAATCAGTCTTACGCCGATTCTTACTTTCGGTTCCCTCTTTTCTCTTCACCATCATCGTCTTCTTCGGTTCCCCAGGAAGACCAGACTTCTGATACCAAGTCAGAATCGCAAGCTGCCGATGAACCGAAGAAGTCGGGTTTTGATCCGGAGTCGTTAGAAAGAGGTGCAAAAGCTCTCCGCGAAATCAATAGTTCTCCATATGCTAAACAGGTGTTTGATTTAATGAGAAAGCAGGAACAAAGTCGCCTTGCTGAGTTAGATGCCGAGAAAGTTCACTACGAAGTAATTCAGTCTCAAGTTGATATTGAAAGGCAGCGGAAAATGGCTGAAGAACAACGGAATTTAATACAAGAGCAAGCACAGAGGCAAGCCCAAGTGCTGCGATATGAAGATGAATTGGCAAGGAAAAGAATGCAGGCAGATCATGAAACCCAGAGGCAACATAATGTTGAATTGGTGAGGATGCAAGAGGAGTCTTCTGTTAGAAAGGAACAGGCAAAGCGGGCTACTGAAGAACAGATTCAAGCTCAGCAGCGTCAAACAGAGAGAGAGAGAGCTGAAATAGAAAGGGAAACCATAAGGGTTAAGGCCATGGCAGAGGCTGAGGGCCGAGCTCACGAAGCAAAACTTACTGAGGATCATAAAAGGAGAATGCTTATAGAACGGATGCAGGGTGAAAAAGACAAATGGCTTGCTGCAATTAACACAACTTTCAGTCATATTGAAGGTGGTTTAAGGGTGTTATTGACTGATAGGGACAAATTACTATTGGCTGTTGGAGGAGCTACTGCATTAGCTGCAGGAGTATATACAACTAGAGAAGGTTCTAAAGTGACATGGGGCTATATTAATCGGATTTTGGGCCAGCCATCATTGATCCGTGAATCTTCCATTGCAAAATTTCCAGGGTCAAGGATCATATCCCAAGCCAAAAACAAACTTGTAAATTTTAGTACCATGGCCAAGGCAGAAAAAACTTCTGAGAGTAAAAATGGCCTTGGAAATGTAGTACTCCATCCGTCATTGCAGAGAAGAATAGAGCATCTTGCACGGGCGACATCAAATACCAAGGCCCACCAGGCACCATTCCGTAACATGCTCTTTTATGGGCCTCCTGGGACTGGTAAAACCATGGTTGCAAGGGAAATAGCTAGAAAATCGGGTTTAGATTATGCCATGATGACTGGAGGAGATGTCGCACCTTTGGGCCCACAGGCTGTTACGAAAATCCATGAGATATTTGACTGGGCCAAGAAATCAAGAAAAGGGTTGCTGCTTTTTATTGATGAGGCAGATGCTTTCCTTTGCGAGCGTAACAGCTCACATATGAGCGAAGCTCAACGAAGTGCTCTAAACGCATTGCTTTTCAGAACTGGTGATCAATCAAGAGACATAGTACTTGTCCTTGCCACAAACAGACCGGGTGATCTCGACAGTGCGGTTACTGACCGCATTGATGAAGTGATCGAATTTCCACTTCCTGGAGAGGAAGAACGTTTTAAATTGTTGAAGCTCTATTTGAACAAATACCTATGTGAAAAAGACAATGGCAGCTCATCCAAGCGGGGGTTCTTACTCAGAAAGGAACCCCAAAAAATTACCATGAAAGATATATCTGAGCACGTGCTCAGAGAGGCTGCCAAGAAAACGGAGGGATTCTCTGGCCGTGAGATTGCCAAACTCATGGCCGGCGTCCAAGCTGCTGTCTATGGGCGCCCAGACTGCACCTTGGATTCCCAGTTGTTTAAAGAAATTATAGATTACAAGGTGGCGGAACATCATCAACGAATAAAACTAGCGGCTGAAGGTGGTCTACCTGACGAAGTGTAG 1899 0.4523 MAAARLSSCVAMAAAVASISTLSNQSYADSYFRFPLFSSPSSSSSVPQEDQTSDTKSESQAADEPKKSGFDPESLERGAKALREINSSPYAKQVFDLMRKQEQSRLAELDAEKVHYEVIQSQVDIERQRKMAEEQRNLIQEQAQRQAQVLRYEDELARKRMQADHETQRQHNVELVRMQEESSVRKEQAKRATEEQIQAQQRQTERERAEIERETIRVKAMAEAEGRAHEAKLTEDHKRRMLIERMQGEKDKWLAAINTTFSHIEGGLRVLLTDRDKLLLAVGGATALAAGVYTTREGSKVTWGYINRILGQPSLIRESSIAKFPGSRIISQAKNKLVNFSTMAKAEKTSESKNGLGNVVLHPSLQRRIEHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSRKGLLLFIDEADAFLCERNSSHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERFKLLKLYLNKYLCEKDNGSSSKRGFLLRKEPQKITMKDISEHVLREAAKKTEGFSGREIAKLMAGVQAAVYGRPDCTLDSQLFKEIIDYKVAEHHQRIKLAAEGGLPDEV 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1440 632 MobiDBLite consensus disorder prediction 56 74 - -
Glsi05g1440 632 Pfam ATPase family associated with various cellular activities (AAA) 389 516 IPR003959 GO:0005524|GO:0016887
Glsi05g1440 632 PANTHER PUTATIVE ATP-ASE 16 625 - -
Glsi05g1440 632 Pfam ATPase family AAA domain-containing protein 3, N-terminal 50 317 IPR021911 -
Glsi05g1440 632 Coils Coil 122 145 - -
Glsi05g1440 632 MobiDBLite consensus disorder prediction 39 74 - -
Glsi05g1440 632 Gene3D - 330 535 IPR027417 -
Glsi05g1440 632 MobiDBLite consensus disorder prediction 162 193 - -
Glsi05g1440 632 FunFam ATPase family AAA domain-containing protein 3 343 533 - -
Glsi05g1440 632 MobiDBLite consensus disorder prediction 39 55 - -
Glsi05g1440 632 SMART AAA_5 385 518 IPR003593 GO:0016887
Glsi05g1440 632 MobiDBLite consensus disorder prediction 162 209 - -
Glsi05g1440 632 Coils Coil 183 217 - -
Glsi05g1440 632 ProSitePatterns AAA-protein family signature. 488 507 IPR003960 GO:0005524|GO:0016887
Glsi05g1440 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 613 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1440 Glsi-ChrGlsi05 63117079 63123025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1440 365 594 Miscellaneous Gene Families AT5G53170 28.870 1.98e-13 71.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1440 05 63117079 63123025 Glsi05g1440 05 63117079 63123025 ECH