Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1345 ATGGCGTTGTCTACAACTCTCACTGCCTCACTCGTTCTCTCCCTTCTCCTGCTGCATCTCACAGAGACGATTGTGGAAGTGCATGTGAAGGAAGGTGCAAGCTATCATCGAGGCCACATCTGTGTAAGAGAGCATGTGGAAGCTGCTGTGCGCAGTGCAAGTGTGTTCCTCCAGGCACCTTCGGCAACCTTGATTCTTGTCCTTGCTACGCCAACCTCACCACCCGCAACCAAATTCCCAAGTATTCAGCAGTTGTACGCTAACGGCGCAAGACATTTTCAATGGGCTAAAGGATGGGCAAGGTGGCCCAAACCAATGGACCCAGAATTCAAAAAATGGAACCCAACGGCTAGTTCTTGTGTTTTTGGTGAAATGCGCCGTACCAACGGTCATATTTTTCTTGCCTCGTTTTCCAGTGATCTTGAATCAGTTTCAATGGAGACCCCATCCTCCACGAGAAGAGTCACGAGATCTCAAACCTTGGCTGCTTCGAATAGCAATTCTAACAGCAGCACTCACTTCAACAACATCCCAGTTTCAAGAAAGATTGAAGATTCTGATAGTCTGTCAAAATCAAGGCAAAGAAATGGGAAGCAACAAGACCGATCTGCCCTCATTGATATAACGAACGATTCTCCAATCGTGGGGCTTGCCAGTGGCAATCTTGAGACCCCGTCGTCTTCCATAGCCAAGCAGAGGGGAAGTCGAATGAAGAACACACCTGGGTCCGGTGAGGCTCTGCTCAGGGGTCAGGTGAAGACCCTCTTGCAGAAGGTGGAAGAAGAGGCAGAGCTTTCGAAACTCTCGCTGGAAGGCCGTCCCTCCCTTAAACTTTCTAATTACCCGATGGGAATTCTTGCCTCTACTGCGGCAAATACGCCCCAGATCTCGAATCTTTTGGGCGATGGATGTGTGAATAATGGCACTGATGAGGCTTCAGTAGTGAATGGAAAGAATCAAGAGAGTGCTGATCAATCTGAAAAGAATCTGATAACGAGGTCGCTCCTTCTTGATTTCTCAGAGAAACCTGAAATTTCCGATCCATCATCAGAATGCTCCTCTGAGCTGACTTATCAGGTAGTACGAGGAGGTAGCGGCTGCATAGACGAGCCCACTAAAGAAGATGATGATGCATCTATCTGGTCGATACAGGTCAATGCAAGCACACATGATGAGGATGAGGAGGAAATAACTGAAGAAGAAGAGGAGGAAGAAGAAGAAGATTATTCTGAGGATATTGAAGAAGATGATGATGGAGGGTTGCTTGATGAACTGTGTGAAGGCATGAACAACATTAGTGTGAACGAAAGGGTGGCTCCCAAGTTTGCAGGAAAGCACACGAGATTTGTTTACAACAGTGATGACGAACTTGTGGGAGAAGAAGAAGAAGAAAACTGTGATGAGAGTGAAGAAGTAATTGCTTCGCCTAGCGTACTGCGTTTGAAGGGCCTGCCAACCCCAAAAGGAAAGCACCTACGCTTTTCTGAGGAGGAAGAAGGAAAAATTGATATGTGA 1515 0.4713 MALSTTLTASLVLSLLLLHLTETIVEVHVKEGASYHRGHICVREHVEAAVRSASVFLQAPSATLILVLATPTSPPATKFPSIQQLYANGARHFQWAKGWARWPKPMDPEFKKWNPTASSCVFGEMRRTNGHIFLASFSSDLESVSMETPSSTRRVTRSQTLAASNSNSNSSTHFNNIPVSRKIEDSDSLSKSRQRNGKQQDRSALIDITNDSPIVGLASGNLETPSSSIAKQRGSRMKNTPGSGEALLRGQVKTLLQKVEEEAELSKLSLEGRPSLKLSNYPMGILASTAANTPQISNLLGDGCVNNGTDEASVVNGKNQESADQSEKNLITRSLLLDFSEKPEISDPSSECSSELTYQVVRGGSGCIDEPTKEDDDASIWSIQVNASTHDEDEEEITEEEEEEEEEDYSEDIEEDDDGGLLDELCEGMNNISVNERVAPKFAGKHTRFVYNSDDELVGEEEEENCDESEEVIASPSVLRLKGLPTPKGKHLRFSEEEEGKIDM 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1345 504 MobiDBLite consensus disorder prediction 148 183 - -
Glsi05g1345 504 MobiDBLite consensus disorder prediction 385 420 - -
Glsi05g1345 504 MobiDBLite consensus disorder prediction 184 200 - -
Glsi05g1345 504 Coils Coil 387 407 - -
Glsi05g1345 504 MobiDBLite consensus disorder prediction 214 239 - -
Glsi05g1345 504 MobiDBLite consensus disorder prediction 148 244 - -
Glsi05g1345 504 MobiDBLite consensus disorder prediction 392 420 - -
Glsi05g1345 504 PANTHER EXPRESSED PROTEIN 146 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1345 Glsi-ChrGlsi05 62576344 62580362 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1345 05 62576344 62580362 Glsi09g0638 09 4416425 4417710 CCT
Glsi05g1345 05 62576344 62580362 Glsi05g1345 05 62576344 62580362 ECH