Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1339 ATGGCGGACGCAGTGAAGCAAATCTTGGCAAAACCGATCCAGTTAGCGGACCAAGTAACCAAGGCTGCTGATGAGGCTAGCTCTTCGTTCAGGCAGGAATGTGCAGAGCTCAAATACAAAACCGAGAAGCTAGCGGGGCTTCTCCGCCAGGCGGCCAGAGCCAGCTCCGACCTCTACGAGCGCCCCACTCGACGGATCATTGAAGAAACTGAACAGGTCCTTGACAAAGCTCTGTCATTGATTCTCAAATGCCGCGCCAATGGCCTTATGAAGCGCGTCTTCACCATCATCCCCGCCGCCGCGTTTCGCAAGATGTATTCTCAGCTCGAGAATTCAATCGGCGACGTATCTTGGCTCCTCCGTGTCTCTACTCCGGCGGAGGATCGCGGCGACGAGTATCTGGGTCTTCCTCCTATTGCAGCAAATGAACCAAACCTATATCTTATATGGGAGCAAGTTGCGATTCTTTATACAGGTGCTCTGGAAGAGCGATCTGATGCAGCGGCTTCGCTGGTGTCACTTGCTCGGGACAACGATCGGTACGGGAAGTTGATCATCGAGGAAGGTGGGGTTGGACCTTTGTTGAAATTGCTCAAAGAGGGTAAGATGGAAGGTCAAGAGAATGCTGCAAGAGCAATTGGGCTTCTGGGACGTGACCCCGAAAGCATTGAGCACCTGATCCATGCTGGTATATGCTCAGTGTTTGCGAAAATCCTCAAAGAAGGTCCAATGAAAGTCCAAGCGGTGGTGGCGTGGGCTGTGTCAGAGCTTTTGGCGAATTACCCCAAATGCCAAGATCTTTTTGCTCAGCACAATATAATCCGCTTGCTTGTCAGCCATCTTGCATTCGAAACCATTCAAGAACATAGTAAGTATGCCATCGCCAGCATCAAACCCACATCAATCCATGCGGTTGTGATGGCAAGTAACAATTCTAATTCCAATGACAATAATATCAGAAAGGCCAACGAGGATGATGACAAGCAGATTCAGAGTCGGATTCAGCATCCCTTGGGTAATGGAACCCCAAATCAGATGCATAAAGTGGTCACAAGCACCATGGCAATGAATGCTGCTTCCAAGCAGTCTAAGCAAGGCAACGAGGGAAATCGGAACAACCAAACCAGTCATCCCAATAGCAATGGCCTTAGTAATGGTAAGCAAAACCATCAACCGCATCACCAGCAAAACTATTCGCATTCGGGAATTAACATGAAGGGAAGGGAACTAGAAGACCCTGAGATTAAAGCCAGCATGAAAGCAATGGCAGCAAGAGCCCTGTGGCACCTAGCCAAGGGTAACTCACCCATTTGTCGTAGCATCACAGAATCAAGGGCTCTCCTGTGCTTTGCAGTTCTTCTTGAGAAAGGACGTAAAGATGTGCAGTACAATTCTGCCATGGCAGTGATGGAGATTACTGCAGTGGCAGAGAAAGATGCTGAATTGAGAAGATCCGCATTCAAGCCCAACTCTCCTGCTTGCAAAGCAGTTGTTGATCAAGTGCTAAAGATCATAGAGAAAGCAGATTCAGACCTCTTGATTCCTTGCATGAAGGCTATTGGGAATTTAGCAAGGACATTCCGAGCAACAGAGACAAGAATGATTGCTCCCTTAGTGCGACTTCTGGACGAAAGAGATGCTGAAGTATCAAGGGAGGCATGCATCGCCCTCACAAAATTTGCCTGCACGGAAAACTACCTTCACCTTGATCACTCCAAGGCAATTATAAGCACAGGTGGGGCAAAACACTTGATTCAGCTTGTGTATTTTGGAGAACAGATCGTTCAGATTTCAGCGTTAGTTTTGCTCTGCTATATTGCATTACATGTCCCAGACAGTGAAGAACTTGCCAAGGCAGAGGTGCTTACTGTACTCGAATGGGCATCCAAGCAATCTTGCATGACACAAGATGAAGAAATCGAGGCATTGTTGCAAGAAGCCAGGAGTAGGTTGGAGCTTTACCAGTCTAGAGGTTCAAGAGGATTCCATAAATTACATCAATAG 2004 0.4785 MADAVKQILAKPIQLADQVTKAADEASSSFRQECAELKYKTEKLAGLLRQAARASSDLYERPTRRIIEETEQVLDKALSLILKCRANGLMKRVFTIIPAAAFRKMYSQLENSIGDVSWLLRVSTPAEDRGDEYLGLPPIAANEPNLYLIWEQVAILYTGALEERSDAAASLVSLARDNDRYGKLIIEEGGVGPLLKLLKEGKMEGQENAARAIGLLGRDPESIEHLIHAGICSVFAKILKEGPMKVQAVVAWAVSELLANYPKCQDLFAQHNIIRLLVSHLAFETIQEHSKYAIASIKPTSIHAVVMASNNSNSNDNNIRKANEDDDKQIQSRIQHPLGNGTPNQMHKVVTSTMAMNAASKQSKQGNEGNRNNQTSHPNSNGLSNGKQNHQPHHQQNYSHSGINMKGRELEDPEIKASMKAMAARALWHLAKGNSPICRSITESRALLCFAVLLEKGRKDVQYNSAMAVMEITAVAEKDAELRRSAFKPNSPACKAVVDQVLKIIEKADSDLLIPCMKAIGNLARTFRATETRMIAPLVRLLDERDAEVSREACIALTKFACTENYLHLDHSKAIISTGGAKHLIQLVYFGEQIVQISALVLLCYIALHVPDSEELAKAEVLTVLEWASKQSCMTQDEEIEALLQEARSRLELYQSRGSRGFHKLHQ 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1339 667 SMART arm_5 434 474 IPR000225 GO:0005515
Glsi05g1339 667 SMART arm_5 522 562 IPR000225 GO:0005515
Glsi05g1339 667 SMART arm_5 219 259 IPR000225 GO:0005515
Glsi05g1339 667 SMART arm_5 177 218 IPR000225 GO:0005515
Glsi05g1339 667 SMART arm_5 568 608 IPR000225 GO:0005515
Glsi05g1339 667 Gene3D - 408 487 IPR011989 -
Glsi05g1339 667 MobiDBLite consensus disorder prediction 309 405 - -
Glsi05g1339 667 SUPERFAMILY ARM repeat 155 628 IPR016024 -
Glsi05g1339 667 Coils Coil 637 657 - -
Glsi05g1339 667 Gene3D - 3 122 IPR036537 GO:0007166
Glsi05g1339 667 FunFam Armadillo repeat only 4 2 122 - -
Glsi05g1339 667 PANTHER ARMADILLO REPEAT ONLY 4 1 659 - -
Glsi05g1339 667 Gene3D - 156 334 IPR011989 -
Glsi05g1339 667 Gene3D - 488 635 IPR011989 -
Glsi05g1339 667 MobiDBLite consensus disorder prediction 333 403 - -
Glsi05g1339 667 FunFam Armadillo repeat only 2 151 320 - -
Glsi05g1339 667 FunFam Armadillo repeat only 2 395 651 - -
Glsi05g1339 667 Pfam Armadillo/beta-catenin-like repeat 184 215 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1339 Glsi-ChrGlsi05 62512022 62514025 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1339 05 62512022 62514025 Glsi05g1339 05 62512022 62514025 ECH