Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1258 ATGAGAGAAACTCTGCGTCAATGTTCTGCAAACTACGTACCTTTGTCACCTATCATTTTCTTAGAACGAGCAGCCAATGTTTACGGTGATAAGGTCTCCATCATCTATGGCGAGGATGTGAGATTTTCTTGGAGAGAAACCCATCAAAGATGCCTCAAGCTCGCTTCTGCTTTGGTCAACTTGGGAGTTTCCCACCATGATTTCGTTGTGGCTTTGGCACCAAACATTCCAGCGCTCTATGAGCTGCATTTTGCTGTTCCTATGGCAGGGGCAATTCTTTCTGCACTCAACATCAAATTGGATTTAACAACATTGGCTATGTTATTGGAACAATTAGATGCTAAAATATTTTTTGTGGACTATGAGTTTGTTGATGTTGCGCTTAAAGCGCTTGACATATTGTCCCAAAAAATACGCAAACCACCGCTAATCGTTCTTATTCCAGATTATGACCAAAAACCACCTTTCCTTTTTAACAATCTCCCACCAGATACCCTGAACTTTAATGATCTGCTTGCTAAGGGACAAGAAGATTTTGAGACTATAATACCAAGCAATGAATGTAATCCTATATCAGTGAATTATACATCTGGCTCCACAGGCACTCCAAAAGGAGTTGTTTACAGTCACAGAGCTGCCTATCTTAATTCACTGGCAGCAATCTCTCGCTTTGACATGAAACCAATGCTAGTGTTTCTATGGACAGTGGACATGTTTCGATGCAATGGATGGTGCTTCCCTTGGGCAATGGCTGCTCTTGGTGGCACCAATATTTGTCTCAGAAATGTCTCAGCAAAAGTCATATGTGATGCAATCTACCTTCACAAGGTGACTCATTTGTGTGGTCCACCCACCCTTTTGAACATAATTGCAGATGCACCAGCCAGTGAGCAGTGGCCTCTGTCTTTCAGTGTGAGTGTCACAGTTGCTGGTGTGCTACCACCATGCCAAGTTCTCTGCAAGGTAGCAAAACTTGGATTTAATGTGAACGTTGGATATGGTATGACAGAAGCTATGGGTCCAGTATTGGTAAGACCGTGGAAACCCAATTCAGGTGGCGAACTCACAGTCACAGAAGTAAATTATGGTGATCAAGGGCTTCCCATCTTTATGATGGAAGGGATTGATGTGAAAGATCCAAAGACTATGAAGAGTACTCCTTGTGACGGAAAAAGCATTGGTGAGATAATGTTCAAAGGCAATACTTTGATGTTGGGGTACCTTAAGAATCCGCAAGCAACAGAAGAAGCTTTCAGGGATGGATGGTATAGGACAGGGGACCTTGCTATGAGGCGGAGCGATGGTTATATAAGATTGAAGGATAGGGAAAAGGATATCATATATGCGAAGGGAGGGGCTGTGAGCTCCCTCGAGGTAGAGGCAGTGTTGTTGACTCACCCAGAGGTTTTGAATGCTGCAGTTGTGGGGGAATATGATGACCATTTGATGGAGTTCCCCATTGCAATTATCAAATTAAAAGAAGGATGTGGCACCACTGCTGAAGACATCATGAAGTTTTGTGAAGTTGAGTTAGATACTCATATGGTTCCTAAGAATGTAGTTTTTGGGGATTTGCCTGTTAACTCAACTGGGAAAGTGCAAAAGTTTCTGATCAGAGAGAAGATAAAAAACGGTGGATGA 1641 0.4278 MRETLRQCSANYVPLSPIIFLERAANVYGDKVSIIYGEDVRFSWRETHQRCLKLASALVNLGVSHHDFVVALAPNIPALYELHFAVPMAGAILSALNIKLDLTTLAMLLEQLDAKIFFVDYEFVDVALKALDILSQKIRKPPLIVLIPDYDQKPPFLFNNLPPDTLNFNDLLAKGQEDFETIIPSNECNPISVNYTSGSTGTPKGVVYSHRAAYLNSLAAISRFDMKPMLVFLWTVDMFRCNGWCFPWAMAALGGTNICLRNVSAKVICDAIYLHKVTHLCGPPTLLNIIADAPASEQWPLSFSVSVTVAGVLPPCQVLCKVAKLGFNVNVGYGMTEAMGPVLVRPWKPNSGGELTVTEVNYGDQGLPIFMMEGIDVKDPKTMKSTPCDGKSIGEIMFKGNTLMLGYLKNPQATEEAFRDGWYRTGDLAMRRSDGYIRLKDREKDIIYAKGGAVSSLEVEAVLLTHPEVLNAAVVGEYDDHLMEFPIAIIKLKEGCGTTAEDIMKFCEVELDTHMVPKNVVFGDLPVNSTGKVQKFLIREKIKNGG 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1258 546 Pfam AMP-binding enzyme 21 447 IPR000873 -
Glsi05g1258 546 SUPERFAMILY Acetyl-CoA synthetase-like 20 544 - -
Glsi05g1258 546 Gene3D - 4 444 IPR042099 -
Glsi05g1258 546 PANTHER ACYL-ACTIVATING ENZYME 2 544 - -
Glsi05g1258 546 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Glsi05g1258 546 Gene3D - 445 544 IPR045851 -
Glsi05g1258 546 Pfam AMP-binding enzyme C-terminal domain 458 532 IPR025110 -
Glsi05g1258 546 CDD ttLC_FACS_AEE21_like 12 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1258 Glsi-ChrGlsi05 62010363 62019208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1258 79 543 Miscellaneous Gene Families AT1G20560 48.712 2.71e-157 456
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1258 05 62010363 62019208 Glsi05g1258 05 62010363 62019208 ECH