Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1253 ATGGAAAGTCATGAAGGAGATTCTTTTAAACCCGAGGAGCAGTTCTCTGACACGAATTATTACAAACAGGGAAGCAATGGAAATCTTGTTTTGGAAAATGCCTTATTTGATGGCAACCAGTTTAAAACTGATACTCATGATCAGCTCCTACAAATGGTCTTTGAACTTAGATTTCAGAACGAATTCTTGAAGTCTCAGTTTGAGGATCTTAGCAGTCCAAACAGTGTACATAGTGACTCTAGTCCTCAAAAAAGAGTTGGTGGCCCAGAAGATGGGGAATCTGACATCATTAAAGAATTGCAGGAAAGGATAAAATCATTGAATAAAGAACTTCTTGTTGAAAAACAAACAAGTGGTGCAGCTGAAGAAGCTCTGAAGCATCTTCAAGTGGCATACTCAGAGGCAGATGCAAAAGCCCAAGAGCTCTCTGAAAAGCTTGCAGAAGCTCAAAAGAAGTTAGATCAAGAAATTAAAGAGCGTGAAGAGAAGTACACAGAACTTGACTCAAAGTTTAACAGACTTCACAAACGAGCAAAACAGCGTATTCAAGAGATTCAAAAGGAAAAAGATGATCTTGAGGTCCGATTTAGTGAGGTGAATGAAAAGGCTCAGCAAGCTTCATCCCAGCAGTCAGCATTGCAGCAAGAGTTAGAGCGCACAAGGCAGCAAGCGAATGAGGCACTGAAAGCCATGGATGGGGATAGACAGCAACTAAGAAGGGCAAACAACAAACTTCGAGATACCATTGAGGATTTACGGCGTTCATTGCAACCTAAAGAGAGTGCTCTTGAGGAATTGCAACAGTCACTTGCAGAAAAGGAACAGATGATGGAAGATATGAGAGGTTTGCTTCAGGCTGCTGAAGAAAAAAAGCAAGCTGCACTGGCCGAGCTTTCAGCTAAACATCAAAAGAATATAGAAAGTTTGGAGGCTCAACTTAATGATGCAATATCTGATAGAAGTAAGGCGGTTGAAACTATTTCTTCATTGCAGGTGCTTGTTGCGGAGAAAGAATCTAAAATTGCGGAGATAGAGGCAGCATTAACTGGGGAATCAGCACGACTTAGAGCAGCTGTTGAAAGTGTGAAGGGGGAGCTTTCTCACCTGGAACAAGAGCATGAGAAAGAAAAGGAAAGCTGGGAGAGTGCATCTCAGGCACTTAAAGCGAAACTTGAAATTGCAGAGAGCAACTGCATACGTGCTGAAATTGAAGTATCAAAAACGAGAAGTCAGCTGGAATCTGAAGTGGCTGCACAAACCCAGATTCTCAATATGAGAGATGCAGAATTGTTGGCTGCCCTCGGAGAGATCAAACACCTTGAGAATGAATTTTCTTCCTATAAGCTTCGTGCACATGCACTTCTTCAGAAGAAGGATGCAGAACTGGCTGCAGCAAAAGACTCTGAGCAACTTAAAGCTCTTGAGGAAGCTCTAAAAGAGGCTGAAAGTGAAGTATTATCAATAACAGCAGAAAGGGATAGAATTCTTCAAGATCTTCAATATGCTACGATAAATCATGAGAAAGAAATCACAGAAAGAGACACAACCCTTGAAAACGCCAAGGAGCAGATAAGAAGCTTAGAAATAAAGCTTGATTCTGCTAATGCTCAGCACATCAAAGAGAGAGAAGCATGGGGACTGAGCCTTCAAAATGTAGAAGAAACATGGCGAATTAGATATGAGACAATGAAGACTGAATCTGAAGGATCTTCAGCACAAGATGTACAAAAGGAACTGGTAGAACTCAAACAACAGTACAAAAAGTTGAAGGAAGAGCATAATTCCTTTCGGGATCTTGCTGATCGAATGATTGAGGAGAAAGACAATGAAATATCTAGACTTTTAGATGAAAATAATAATCTTCATCAGTCCCTGCAATCTAGCCCATCGGTTGATCAATATGATTATTATAGCACAGCTTCGCCTAAAGAGGATACACTGAATTTAAGTCCCTCGTCTGTAGAAGAGCAAATTCTGCTTTTGGCTAGACAACAAGCTCAAAGAGAGGAAGAACTGGCACGATCACAGAGGCATATTTTGGCTCTTCGAGAAGAAATTGAGGAACTGGAACGTGAAAATTGTCTCCATAGCCAACAGGAAGCAATGTTAAAGGCTGAGATTCGCAACATGGAAAGAACAAAAAAGAGGGAAGGAGTAGATATGACATATTTGAAAAATGTTATATTAAAGCTTCTTGAGACAGGTGAAGTGGAAGCATTATTGCCAGTTATTGGAATGCTGCTTCAGTTTAGTCCAGAAGAGATGCAGAGGTGTCTACATGCCTATCACAATTCCACAGATGCTCCCCCCAGTCCAGCAACTGATGCTTCAGGATCTGACCTATCTCTTTTCTCAAGATTCTCATTTTCATAG 2373 0.4092 MESHEGDSFKPEEQFSDTNYYKQGSNGNLVLENALFDGNQFKTDTHDQLLQMVFELRFQNEFLKSQFEDLSSPNSVHSDSSPQKRVGGPEDGESDIIKELQERIKSLNKELLVEKQTSGAAEEALKHLQVAYSEADAKAQELSEKLAEAQKKLDQEIKEREEKYTELDSKFNRLHKRAKQRIQEIQKEKDDLEVRFSEVNEKAQQASSQQSALQQELERTRQQANEALKAMDGDRQQLRRANNKLRDTIEDLRRSLQPKESALEELQQSLAEKEQMMEDMRGLLQAAEEKKQAALAELSAKHQKNIESLEAQLNDAISDRSKAVETISSLQVLVAEKESKIAEIEAALTGESARLRAAVESVKGELSHLEQEHEKEKESWESASQALKAKLEIAESNCIRAEIEVSKTRSQLESEVAAQTQILNMRDAELLAALGEIKHLENEFSSYKLRAHALLQKKDAELAAAKDSEQLKALEEALKEAESEVLSITAERDRILQDLQYATINHEKEITERDTTLENAKEQIRSLEIKLDSANAQHIKEREAWGLSLQNVEETWRIRYETMKTESEGSSAQDVQKELVELKQQYKKLKEEHNSFRDLADRMIEEKDNEISRLLDENNNLHQSLQSSPSVDQYDYYSTASPKEDTLNLSPSSVEEQILLLARQQAQREEELARSQRHILALREEIEELERENCLHSQQEAMLKAEIRNMERTKKREGVDMTYLKNVILKLLETGEVEALLPVIGMLLQFSPEEMQRCLHAYHNSTDAPPSPATDASGSDLSLFSRFSFS 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1253 790 Coils Coil 510 544 - -
Glsi05g1253 790 Coils Coil 672 692 - -
Glsi05g1253 790 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 56 787 - -
Glsi05g1253 790 Coils Coil 572 624 - -
Glsi05g1253 790 Coils Coil 125 170 - -
Glsi05g1253 790 MobiDBLite consensus disorder prediction 69 92 - -
Glsi05g1253 790 Coils Coil 437 498 - -
Glsi05g1253 790 SMART 1grip 717 761 IPR000237 -
Glsi05g1253 790 MobiDBLite consensus disorder prediction 1 21 - -
Glsi05g1253 790 Gene3D - 152 304 - -
Glsi05g1253 790 Coils Coil 175 347 - -
Glsi05g1253 790 Coils Coil 90 117 - -
Glsi05g1253 790 ProSiteProfiles GRIP domain profile. 714 761 IPR000237 -
Glsi05g1253 790 Pfam GRIP domain 718 757 IPR000237 -
Glsi05g1253 790 MobiDBLite consensus disorder prediction 201 221 - -
Glsi05g1253 790 Coils Coil 352 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1253 Glsi-ChrGlsi05 61976262 61988956 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1253 05 61976262 61988956 Glsi05g1253 05 61976262 61988956 ECH