Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1246 ATGTCCAACGCTGGTACGGGCACAGACGATCCTGATTCCTGGTCCCACAGCCATCGTTCTAGAACGAGAAACAAACATCGGATTCGCCACGGTGGTTGGTCACAGACCTCTAAGGTCTCTCCACTTGTATCGAAAACACAGTCGTCCGGCATCGTTTCAGCGGAACCGGCCGAACATTCCGCCCGGCGTCGCAGTCGTCTTGGTCATTTACATCATCGCATATCCTCCTTCCCTTCTGCTTCATATAACTCATCCCTTTACCTTTTGTTTTGTTCCCATTGTCTTGCTTTGCCAGAGGAGATTCCAGAATACAGCTCCCTTCGAGTTCCTAAGATTTTGACAATTTACGTTGTGGTTGGGATGCTGAGGCTTTTGGCTGTGTCCAGTGATTGCATGACCTGGGCGATGACTCTAGATTGCTTCCTCTTTGGAGACAGATATCTTCTGCTGAATGAAAAGGGTTTGAAAGTGAAGGAGCAACTTGGAGTCAGGGCCAGTTGCATTGATTGTCTAGACCGTGCAAACGTAACTCAGATTAGAAGGCTTGGTGTCTTTGGTGCAGAAGAAACCATTAGTTCACATCCAAATCTAGATGAAAGTTTCAAAATCTTATGGGCTAACCACGAGGATGATGTAAGTGTTCAATATTCAGGCACTCCTGCTCTAAAAGGAGACTTTGTCAGATTTGGGCACTGGACAATGCAAGGAATACTGAAAGATGGTTGGAATGCTTTTCTACGCTATTATCTGAATAATTTTTGTGATGGAACAAAGCAGGACGCAATCGATCTCTTACAAGGACATTACATAGTTTCTGTCAGCCAAGATCTGGTTCCTTCCTCTCAGAAAGGAGGCCTTGAAGCTATAGCTTCCTTTCCTTTGGCTTTTCTCTCTGGTATAGATTGGATTCCTTTTTGCAACCATTTCTTTGAGGCAAGGCCGGTGACCTCTTCTGCTAGTGCTTGGTTAGTGAACTCTGTATCACTTATGGAACCTGGACAGTTCACAACCAACTCGAAGGGTGATCTGGACCAAAATTCCTGGGACAGCCTATACCAACTAACAGCTAATCTTCCTAAATCTCTGCCACCAGAGCAATTGTATGCCACCCAGCTGATACAGCTTCAAGAGATGGGCTTCTTTGATAGGCAAACATACAAGCTCTTATTGCCACTTCAGGGGATGTTCATGCGGCAGTTGAACGGCCTCTGGGAAACACTGGACATTAGCTCATAA 1236 0.4571 MSNAGTGTDDPDSWSHSHRSRTRNKHRIRHGGWSQTSKVSPLVSKTQSSGIVSAEPAEHSARRRSRLGHLHHRISSFPSASYNSSLYLLFCSHCLALPEEIPEYSSLRVPKILTIYVVVGMLRLLAVSSDCMTWAMTLDCFLFGDRYLLLNEKGLKVKEQLGVRASCIDCLDRANVTQIRRLGVFGAEETISSHPNLDESFKILWANHEDDVSVQYSGTPALKGDFVRFGHWTMQGILKDGWNAFLRYYLNNFCDGTKQDAIDLLQGHYIVSVSQDLVPSSQKGGLEAIASFPLAFLSGIDWIPFCNHFFEARPVTSSASAWLVNSVSLMEPGQFTTNSKGDLDQNSWDSLYQLTANLPKSLPPEQLYATQLIQLQEMGFFDRQTYKLLLPLQGMFMRQLNGLWETLDISS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1246 411 ProSiteProfiles Sac phosphatase domain profile. 163 218 IPR002013 GO:0016791
Glsi05g1246 411 Gene3D - 344 390 - -
Glsi05g1246 411 MobiDBLite consensus disorder prediction 33 54 - -
Glsi05g1246 411 MobiDBLite consensus disorder prediction 1 62 - -
Glsi05g1246 411 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 145 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1246 Glsi-ChrGlsi05 61928912 61943303 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1246 138 297 Acyl Lipid Metabolism Gene Families AT3G51460 66.860 3.09e-75 243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1246 05 61928912 61943303 Glsi09g0714 09 4908031 4919184 CCT
Glsi05g1246 05 61928912 61943303 Glsi05g1246 05 61928912 61943303 ECH