Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1229 ATGGTTCCTGGTGTCGTGGTTCCCCCAATAAACAAGAAAAAGGGGGAGGGAAGCAAGGAAACCAATCTATTACAACTCATGAGGATAATGGAGCCAATAGGTCCTCTAAGATTCCCTGTGCCAGTAGGCCCATTTCAAGGCCCTTACAAAGGCATGCTATACTTGGGCCTGATTAAAGGACGCTTCAAAGCTTTTATTATCATTCCGGCCGCAATGTTCGTCAAGAAACTGGTTGAGAAAGCTTCCATAAAGAAGCCTGGTGGAAATTCGGATGGGTTAAAAGCCAGCGACGTAGAGCCACGTCTGGTTTTTCATTATGGGCTCCCATCCAATGGTACCAAGTTCGCTTATGACGACATTCAGAAGATTCTTGCTCTTTCTACAAACGATGGCAGAATTAAACTATTTGGAAGAGATAACACTCAAGCCCTTCTCCAATCTACTGAGCCAGTACCTAGCAAGTTTGTACAGGTTTGGGACATTGACAAGAAGCTGTTGTCTGATGTGTACGTTGTCAAAGATGAAATCACTTGCTTTGCTGTCATTCAACATAGCTTCTATATGTATATTGGAGATTCTGTTGGTAATATTTCAGTTTTGAAGCTTAATCAAGAACCATGGCATATAGTACAGATGAAATACACCATACCTCTCTCAGCTTCTTATGGGAATCCAACTGAAGTGTCTGATGATACTTTTGTGACACATATACTGCCACAGCCAGCAGCTGAAAGTAAGAGGGTTCTCATAATTTTTAGGAATGGCCAAATAATATTATGGGATATTCGAGAAAGCAGGTATATTTTCAGAACTGGTGGAAACGTGTCACAACCATCGTATAATGAAACTAAGAAAGTGACTTCTGCATGTTGGGCTTGTCCTTTTGGAAGTAAAGTGGTTGTAGGGTACACCAATGGAGAGCTTTTCATTTGGAATATCCCTTCTCTGAACATGGGAAATGATTCTGCATCTGATTGTAGCACTCAAAACACTCCTATGTTCAAGCTTAACTTAGGATATAAATCCGATAAAATTCCTATAGGGTCAGTAAAATGGATTTATGCTGATGGAAAGGCAAGTCGACTATATATCACCGGAGCTTCTGACTATGCATCTTCAAACTTGTTCCAGGTAGTGTTATTGAATGAGCACATTGAGTCTCGCACAATTAAGCTGGGTCTTCATTTGGCTGAATGTTGTGTTGACATGGAGATCGTATCAACTTCAAGTGAGCAAAGCAAGCATAAACAGGATTCTTTCCTTTTGCTGGGGAAATCAGGCCATGTATATCTGTATGATGACAGTTTGATTGAAAGGTATCTTCTGCAATGGCAGTCTAAGTCCCCACCCTCACTGCCAAGGGAAGTGATTGTGAAGTTGCCACTGGCAGATTCAAGCATCACAGCAGCCATATTCATCTCAGACAATCCCACTGTGCTAAATCCTGAGGATGAGAGTGAAAATGAGTTTTCTTCAAGTGGTATACCCTTGACTGCATTATATTTTGATAGCAAGTCTCCCCTTCTTGTTTCTGGAGACCAGAGTGGAATGGTTCGCATCTTCAGATTCAAACCTGAACCATATTCAACCAACAGCTTCATGTCTCTTACTGGAAGCACAAAGAAAGGGACTGATCATATAATCCAAAGTGTGAAACTTGTAAAGACTAATGGTGCTGTACTGTCTATGAACATAGATCACGGATCTAGACATCTTGCTGTTGGTTCTGATCAAGGATATGTTTCAGTTATTGATATGGATGGCCCAACTCTGTTATATCAGAAGCACATCACAAGTGAAATTAGTACTGGTATCATCTCTCTGCAGTTTCGAACCTGCAGTTTGCGTGGTTTTGAGAAAAACATATTAGCAGTCGGAACAAAGGATTCATCTGTTTTGGCACTTGATAGTGAAACTGGAAACACATTGAGCACTGGCACCGTTCATCCTAAGAAGCCCTCTAAAGCTCTATTCATGCAGGTGTTAGATGGACATAGTGAATCGGGGAAGGGCTCAAATACAAAAGAGGGATTGGACATGAGCGAAGGGAACCATATAGAGGATGAAACCACAAAGCAATTATACATTTTGTTGTGTTCTGAGAAAGCTTTGTATGTCTATTCTTTAGTGCATGTTGTTCAGGGAGTCAAAAAGGTGCTTTACAAGAAGAAGTTTCACACCTCCTCCTGTTGCTGGGCATCCACATTTTACAGTCATTCTGATATTGGCCTTGTACTCCTTTTCACCAATGGAAAAATAGAACTAAGGTGGTCTTTGCCAGAGCTGTCTTTGATGGTGGAGACTTCAATTAGGGGTTTCACATATTCACCTCCGAAGTTAAAGTCTTTTTCCGACAGCCAGATATGTTGTTCATCCGGAGGAGATCTTGTTTTGGTAAATGGTGAGCAGGAAATTTTTGTTGCTTCATTGTTGATCCAAAGGAAAATTTTCAGGCTTTTGGACAGTGTTAGCTGTATCTACAGGAAAGAGAGGGTGCTGTCACAAGAAGAGGTTGTCCCTGGCCCAGTCATACATAAGGAAAAGAAAAAGGGTATCTTCAGCTCTGTTATCAAAGATTTTACTGGCAGTAAAGAGAAGCATGTGACCCTAATGGAAACAGAAGATGCGAAAGAAAGTATACGGGAACTCTCAGTGATCTTTTCAAATGCCAATTTTCCATGTGATGCTGACAATAATGATGATAACCTCGCCATGGATGAAAATGAGCCTGAATTAAACATAGATGACATTGACCTAGAGGAACCTGGAGAAAAACGCCAAGAACAAAGTATATTGGGAGCTCTTAATAAGAAGAAATTGGCTGGAAAATTTCAGGCTCTAAAAGGCAGATTGAAAGACATGAAGAGCAACAACCAGAAAACGTCAGGTAAGGAAGGGCAACAAGATGAGAAAGCTGGTACAGTTGATCAAATTAAGAAAAGATATGGGTTTTCTTCCTCCAATGAAACAAGCATTGCTAAATTGGCAGAAAGCAAGCTGCAGGAGAACACAAGGAAATTGCAGGGTATCAACCTTCGAGCTACAGAGATGCAAGATACTGCAAAGTCATTTTCAACATTGGCAAAACAAGTGCTGCGAACTGCTGAACAGGATAGACAAAGTTGA 3126 0.4095 MVPGVVVPPINKKKGEGSKETNLLQLMRIMEPIGPLRFPVPVGPFQGPYKGMLYLGLIKGRFKAFIIIPAAMFVKKLVEKASIKKPGGNSDGLKASDVEPRLVFHYGLPSNGTKFAYDDIQKILALSTNDGRIKLFGRDNTQALLQSTEPVPSKFVQVWDIDKKLLSDVYVVKDEITCFAVIQHSFYMYIGDSVGNISVLKLNQEPWHIVQMKYTIPLSASYGNPTEVSDDTFVTHILPQPAAESKRVLIIFRNGQIILWDIRESRYIFRTGGNVSQPSYNETKKVTSACWACPFGSKVVVGYTNGELFIWNIPSLNMGNDSASDCSTQNTPMFKLNLGYKSDKIPIGSVKWIYADGKASRLYITGASDYASSNLFQVVLLNEHIESRTIKLGLHLAECCVDMEIVSTSSEQSKHKQDSFLLLGKSGHVYLYDDSLIERYLLQWQSKSPPSLPREVIVKLPLADSSITAAIFISDNPTVLNPEDESENEFSSSGIPLTALYFDSKSPLLVSGDQSGMVRIFRFKPEPYSTNSFMSLTGSTKKGTDHIIQSVKLVKTNGAVLSMNIDHGSRHLAVGSDQGYVSVIDMDGPTLLYQKHITSEISTGIISLQFRTCSLRGFEKNILAVGTKDSSVLALDSETGNTLSTGTVHPKKPSKALFMQVLDGHSESGKGSNTKEGLDMSEGNHIEDETTKQLYILLCSEKALYVYSLVHVVQGVKKVLYKKKFHTSSCCWASTFYSHSDIGLVLLFTNGKIELRWSLPELSLMVETSIRGFTYSPPKLKSFSDSQICCSSGGDLVLVNGEQEIFVASLLIQRKIFRLLDSVSCIYRKERVLSQEEVVPGPVIHKEKKKGIFSSVIKDFTGSKEKHVTLMETEDAKESIRELSVIFSNANFPCDADNNDDNLAMDENEPELNIDDIDLEEPGEKRQEQSILGALNKKKLAGKFQALKGRLKDMKSNNQKTSGKEGQQDEKAGTVDQIKKRYGFSSSNETSIAKLAESKLQENTRKLQGINLRATEMQDTAKSFSTLAKQVLRTAEQDRQS 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1229 1041 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 485 1034 - -
Glsi05g1229 1041 Pfam Lethal giant larvae(Lgl) like, C-terminal 572 816 IPR013905 -
Glsi05g1229 1041 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 240 651 IPR011047 -
Glsi05g1229 1041 SMART WD40_4 544 585 IPR001680 GO:0005515
Glsi05g1229 1041 SMART WD40_4 272 312 IPR001680 GO:0005515
Glsi05g1229 1041 SMART WD40_4 483 522 IPR001680 GO:0005515
Glsi05g1229 1041 CDD R-SNARE_STXBP5_6 977 1033 - -
Glsi05g1229 1041 Gene3D - 121 369 IPR015943 GO:0005515
Glsi05g1229 1041 MobiDBLite consensus disorder prediction 949 977 - -
Glsi05g1229 1041 SUPERFAMILY WD40 repeat-like 116 315 IPR036322 GO:0005515
Glsi05g1229 1041 Gene3D - 486 758 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1229 Glsi-ChrGlsi05 61808687 61819458 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1229 05 61808687 61819458 Glsi05g1229 05 61808687 61819458 ECH