Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1226 ATGACGAGCATCAGGCCATTGTCGGAGGCTGTTCGTAGTTCATTACGTTCTGGCATTATCTTGTTCGACTTGACGCGGGTCGTGGAAGAACTGGTTTTCAATAGTCTGGATGCCGGCGCAACCAAGTTTTGTGTAGCTGACCGACATCAGTTAGTGAGGATTACGAGGGGAAGAAAATCCCACCCCTCATCAGAGGTATCAGTCTTTGTTGGTGTTGGGAACTGTTATATAAAAGTAGTTGATGATGGAGCTGGTATTACTCGAGATGGACTGGTGTTGGTTGGAGAAAGATATGCAACATCAAAGTTACTTAATTTGGCTGATCTGAATGCCACAAGTCAAAACTTTGGTTTTCGGGGGGAAGCTTTAGCTTCCATTTCAGAAGTATCGCTTTTGGAAATTGTTACAAGAACTTATGGAAGGGCAAATGGATATCGTAAAGTATTGAAGGGGTGCAAGTGTCTATTTCTTGGTATAGATGATGATAGAAAGGAAGTGGGAACTACAGTTGTTGTCCGTGATTTATTTTACAACCAACCAGTTCGAAGGAAATATATGCAATCCAGCCAAAAGAAGGTTTTGCAATCAGTCAAGAAATGCATGTTGCGGCTTGCAATTGTGCATCCAAATATTTTGTTCAAAGTTGTTGATATTGAAAGTGAGGATGAACTTCTTTGCACACATTCTTCTTCTTCTCCCCTGTCACTTTTAGCCAGTGGCTTTGGGGTGGAGGTCTCAAGCACTCTTCGTGAATTAGAATTTCAGGACGATATCATAAAGATTTCGGGATTTATATCTGGTCCCTGCAATAGTTTTACCTTGAAGGCCTTACAGTTTGAGCATCTGGACTCATGGAATGCTGATAACAAGTTCCAGAACAAGAAGAGAAGTAGGTCTCAAGCATGTCCAGCTTATATCTTGAATTTGAGTTGCCCCCGGTCTTTGTATGATTTAACCTTTGAGCCATCAAAGACTTGTGTTCAATTTAAGATTCATTTTGCCAATCCAACTTCTTTTTTCTGTAAATGCCAATCTGGCTTCTTTGCACCATGGCCTAAAGCCATTTTCTGTAGGGATTGGGCTTCTATACTGAACTTCATTGAGAAGGCCATCAAACAATTCTGGGAGGAGAACATAAATGATGGAAGGTCCTCCAAATATGCTGCTTATGTTGAACAAGCAGATAAACTGTGCAAGGCAGTTGACAACGCCCCTTCAGCCAAAGCAGATTTATCGAAATGTGGAAACCAAAATTGTATGGATTGCCTTGACCTTTTCTTTCCCACTTCAGACAAGCTAAATGAAGATGATTATCATCTATCCGCCAGGGAAGATATTAGAACCTCCTTTAATTACTTGCATAGGGGCACTGCGAAGTTCAAAGAGAAACAAAATAAGAGAAATGTTTTATACAAGACTGGGTATTCTAGCTTTTCATTGGATGGATCATATGCCAGACGTGCTACTGTGACTAAAAAGCATAACAGTTTGTGGATGTATGACAACAATTGTCTACCTGGAAGAGACTATTTTTTGGATGGTAAATTTGCTGCTGCAGAAATCTTCAATGATTATGCATTTTTTGATGCACCGAGCTCGTCTAATGGAAATAATTACCTTGATATTGATGCCAATGGGTTTAGTGAATTATCTGAAGGTGCTTTACTTTCTGACTGTCATGAGCCCTGTAATGACATAGATATCAGTGGGGATTTTCAAAAGCCTTTTCTGAAGAGCTGCTCTACACAAGGAAGTATTCTGCAAGAGAAGGCTTTGTTTGCAAATGATGAACATGAATTCCGAACTGATAGCTTGAGGACCAAGCAAGATGTGGATGAGTATTGTGGCAGTGAAGAGGACTTAGGCACCCAGCCCTGTACAGACGCTGTGGAAATATTTGACATGCCTAGAGACTCTGCATTTTACCCAAGAGCATCTGGCGAAGAAAACTGTCTTCCTTCAGATTCTTGTTATTCAGAAACACAAATAGGAGGCTCTGGGTCTGATCATGAGTTATTAAAATTGGAATTGTGCCCTTTCTTTGGAAAACCCTTATCTCAAGCTGCTGCATGGGATTTTGGTCAAATGACAGGGACTGATCTTGATGATCTTGGAGGAATACCTAGTTACTATAAAAGAGGTGGTTATATAAAAATTCTAGATAATGAAGAAAATGAATGCAACTTAAGTCGCATTATGTCATGCAGCTCCAACCCAGATCAGTGCACCTCAAGTTTTGTAAACACTGGATCATATTTTGATGTTCCTGATGATTGTAGTAAAATAAATTTTACCGATTCTAGATTAGTTGAATGGCCTGATTGTGATGTTATATATTCTACCAAGTGGTCAGATATTTTAACTGAGGAGTCAGATTGGTTTTGTCCAGATTTATGTGGTGAAAACTACAAGAGACTTAGCAAGAACAGAGTCAAAAGGGATCATGCCAGACTTCCAGCTTTTGAAAAGAATCATGAAAGATCTAGAAGAAGCTTTTCAGCTCCTCCGTTTCATAGAAGCAAAAGAAGGTTTTGTTCTTTAAATCAACCTTCAACAATTATAGCCAAAAGACCTGTTGGCCAAACCTCCAACCATGCGTTAAAGGATAGAGGAGCTGATGAATCTAAGCTTCCTCAGCAATCTTCTGGTGCACTTCACCCAAGCAGTGAGGAACATTTATTGCTTGACCAAAATTCCAATATGAAACAAAGGCCAAATATTGCGGGAGATACACAAGTTAATAACATTAGAGAGTTTGATGGGTTGCAAAGTTTCAATAGTCAAGGCAATGCTCCATTTAAAGAATTGATCTCAAGGAAATTGCAAGATTCCATAGATTACAGGACCAAATGGCGGGATTGCTCACCTCAATTTCCAAAGAATGATAAATCGCTTGATTTTCAAAGTCAAAATAATATTCTGGACATATCTTCTGGATTCTTGCATCTTGCTGGTGATTCGTTGATACCTGAAACTATCAGTAAGAAAGACCTTGAGGATGCCAGAGTTCTTCATCAGGTTGATAAGAAATTCATTCCAGTTGTGGCTGGCAGAACTCTTGCTGTTATTGATCAGCACGCTGCAGATGAACGGATCAGATTGGAAGAATTGCGTCAAAAGGTATTATCAGGAGAAGCAAAGACAATAAACTATCTAGATGCTGAACAGGAACTGGTATTGTCCTGTCTCATGAGATATGCTGTGCTGCCGGAGATTGGCTATCAACTACTGTACAATTATTCTGATCAGATTAAAGATTGGGGATGGATCTGCAACATTCATACTCTAAATTCAAAATCCTTTAAGCAGAATTTAGATATTCTCAACAAGCAGCCAGCCGTCATCACGCTTATTGCGGTGCCCTGCATTTTAGGTGTCAAATTAAATGATGCTGATCTTATGGAATTTCTTCAGCAGCTTGCTGACACGGATGGATCATCAACAATGCCTCCCTCTGTTATACGAGTCCTAAATTTGAAAGCATGCAGAGGTGCAATAATGTTTGGAGACTCATTGCTACCATCTGAATGCTCCCTCCTCGTCGAAGAGCTAAAGCATACATCACTCTGTTTCCAATGTGCTCATGGGCGACCAACTACTGTTCCTCTTGTCAACTTGGAGGCGCTGCATAATCAAGTAGCCAAGCTTGGACTAATGAATGATTGCTCCAATAATAAGTGGCATGGATTACAGAGACATAAAGTAAGTGTTGAACGCGCAGAGCAACGTTTATGTTCTGCTAGAGAGTAG 3750 0.4011 MTSIRPLSEAVRSSLRSGIILFDLTRVVEELVFNSLDAGATKFCVADRHQLVRITRGRKSHPSSEVSVFVGVGNCYIKVVDDGAGITRDGLVLVGERYATSKLLNLADLNATSQNFGFRGEALASISEVSLLEIVTRTYGRANGYRKVLKGCKCLFLGIDDDRKEVGTTVVVRDLFYNQPVRRKYMQSSQKKVLQSVKKCMLRLAIVHPNILFKVVDIESEDELLCTHSSSSPLSLLASGFGVEVSSTLRELEFQDDIIKISGFISGPCNSFTLKALQFEHLDSWNADNKFQNKKRSRSQACPAYILNLSCPRSLYDLTFEPSKTCVQFKIHFANPTSFFCKCQSGFFAPWPKAIFCRDWASILNFIEKAIKQFWEENINDGRSSKYAAYVEQADKLCKAVDNAPSAKADLSKCGNQNCMDCLDLFFPTSDKLNEDDYHLSAREDIRTSFNYLHRGTAKFKEKQNKRNVLYKTGYSSFSLDGSYARRATVTKKHNSLWMYDNNCLPGRDYFLDGKFAAAEIFNDYAFFDAPSSSNGNNYLDIDANGFSELSEGALLSDCHEPCNDIDISGDFQKPFLKSCSTQGSILQEKALFANDEHEFRTDSLRTKQDVDEYCGSEEDLGTQPCTDAVEIFDMPRDSAFYPRASGEENCLPSDSCYSETQIGGSGSDHELLKLELCPFFGKPLSQAAAWDFGQMTGTDLDDLGGIPSYYKRGGYIKILDNEENECNLSRIMSCSSNPDQCTSSFVNTGSYFDVPDDCSKINFTDSRLVEWPDCDVIYSTKWSDILTEESDWFCPDLCGENYKRLSKNRVKRDHARLPAFEKNHERSRRSFSAPPFHRSKRRFCSLNQPSTIIAKRPVGQTSNHALKDRGADESKLPQQSSGALHPSSEEHLLLDQNSNMKQRPNIAGDTQVNNIREFDGLQSFNSQGNAPFKELISRKLQDSIDYRTKWRDCSPQFPKNDKSLDFQSQNNILDISSGFLHLAGDSLIPETISKKDLEDARVLHQVDKKFIPVVAGRTLAVIDQHAADERIRLEELRQKVLSGEAKTINYLDAEQELVLSCLMRYAVLPEIGYQLLYNYSDQIKDWGWICNIHTLNSKSFKQNLDILNKQPAVITLIAVPCILGVKLNDADLMEFLQQLADTDGSSTMPPSVIRVLNLKACRGAIMFGDSLLPSECSLLVEELKHTSLCFQCAHGRPTTVPLVNLEALHNQVAKLGLMNDCSNNKWHGLQRHKVSVERAEQRLCSARE 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1226 1249 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 1208 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Glsi05g1226 1249 SMART DNA_mis_repair_2 237 376 IPR013507 GO:0005524|GO:0006298|GO:0030983
Glsi05g1226 1249 Gene3D - 1154 1215 IPR042120 -
Glsi05g1226 1249 Gene3D - 999 1066 IPR042120 -
Glsi05g1226 1249 Pfam MutL C terminal dimerisation domain 1002 1044 IPR014790 GO:0005524|GO:0006298
Glsi05g1226 1249 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 117 123 IPR014762 -
Glsi05g1226 1249 SUPERFAMILY DNA mismatch repair protein MutL 1110 1203 IPR037198 -
Glsi05g1226 1249 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22 223 IPR036890 -
Glsi05g1226 1249 SUPERFAMILY DNA mismatch repair protein MutL 1001 1044 IPR037198 -
Glsi05g1226 1249 MobiDBLite consensus disorder prediction 855 888 - -
Glsi05g1226 1249 FunFam DNA mismatch repair endonuclease MutL 1 236 - -
Glsi05g1226 1249 Gene3D - 2 231 IPR036890 -
Glsi05g1226 1249 Gene3D - 242 333 IPR014721 -
Glsi05g1226 1249 SMART MutL_C_2 1003 1172 IPR014790 GO:0005524|GO:0006298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1226 Glsi-ChrGlsi05 61775351 61784739 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1226 05 61775351 61784739 Glsi05g1226 05 61775351 61784739 ECH