Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1150 ATGGAGGAGCATGGAGGAAGCAAAAATAGTAGCTTTAGAAAGGGTAGCTTTAGGTTGGGTTTGGGATCAGTGAATGGTTCAAAAGATCATACAGTGATGGAGCTTGGTAGCATTGACACACAGGGACTCCTTCTTGCTGGGAAGAGAGAGAAACAACAACAAACACCACTCACCAACTCTCTCTCCCTTAGAGAGATGAAAACCATCACTGCTATTTGTGACACTTTCTTACCTTCCATTGACGACGTCGTCCCTCACGCCTCCGATGACTCCGTCACCACCTTCTACCGCACTTCAGCCTCTATGGCCGGAACACATAACCGTCTTGGAGGAGTGATAAGTGAGAGACTGAAACACCCAAATACGCAGTTGCTGAGGTTGGTGCTGTGGGTGCTGTCAACATGGTATGGAACATTCATACTGTGTGGCCTACGAAGCCTGTCTCTTCGATTTCCATTCTTCCACAGCTTTCCCAATCTTCCTCTCCACAAACGCCAACTCATTGTCAGGTCTTGGTCTCTCAGTTACTTTCCTCACCTTCGCATGTTTTTCAAGACCATTAAAGTTCTCACTCTTCTTCTCTTCTTTACTCAGCTAGATGAAGCAGAAGACAATCCGTCATGGAAAGCAATTGGATACAGCGGACCTGACCCAGAGTTCAAATGCCAGTTAAAGAATCAATTTTTACAAGGAATATCAAAAGGACATGAACAAAAAGAAGACGAAGATTATGATGCTGAAGAGGTCGTAGGACCTCTTTACAAAGGCCTCGTCCATCTTAATTGCCCACAAGACATCACTGTAGATTCTCTACGACAACGTGGATTCCCTGTCTCTTTTGTTCGTCGGAAAACCAAAGCTCTCAGCTTATCATCTCCTTCTTTAGTTATCCAGTGTGATGCAGTGGTGGTTGGTTCTGGCTCAGGAGGCGGTGTGGTAGCTGGAGCTCTGGCAAAAGCTGGTTACAAAGTACTGGTCCTGGAGAAAGGGAGCTACTGTGCTAGGAACAATCTTTCCCTTCTTGAAGGACCAACCATGGATCAAATGTACCTCTCCCATGGTTTCATTGCAACCGATGATATGCGTGTGCTCATACTAGCAGGATCCACTGTTGGTGGAGGGTCTACAATCAACTGGTCAGCCTGCATTAAAACCCCCAAGCACGTTTGCAAGGAGTGGTGTAATCACCATAAGCTGGAACTGTTTGAAAGCAAATTATACAAAGAAGCCATGGATGTTGTCTCTAAGAAAATGGGAGTTCAATCTGAAATCACGGAGGAAGGTTTCAATAATGTAGTCCTAAGAAGAGGGTGTCAAGAAATGGGTTACACCGTGAGTAATATTCCTCGGAATTCTCCACCAGATCACTATTGTGGTTGGTGCTGCATGGGTTGTAAAGATGGAAGGAAGAAAGGTGCATCAGAAACATGGTTGGTGGACTTGGTGAAATCAGGTAATGGAGCTATTCTTCCGGGTTGTGAGGCAATAAAAGTCTTGCACAAGAAAAAGAAAGGAAGAGATCGAAAAGTAGCACGAGGAGTAGCTTTTGAATTTGAATACAAGGGAGCTAAAGACATATATGTGGTGGAATCCGAGGTCACAATTGTAGCATGTGGAGCACTCAGTACTCCAGCATTGCTGAAAAGAAGCGGCTTAAAGAATGGCAACATAGGGAGACACTTGCATCTTCATCCAGTGGTAATGGCTTGGGGATACTTTCCAGATGCACCATCACCAGAGGTGTGGCCTGAGGAACAGAAGAAGAGCTATGAGGGAGGGATAATGACAGCAATGTCTACTGTAGTTGCTGAGTTTGAATCTTCTGGATATGGAGCAGTGATACAAACACCAGCATTGCATCCTGGTATGTTTTCAATTCTAATGCCATGGGTTTCTGGGATTGACATAAAAGATCGAATGCGCAGATTTCCTAGAACAGCCCACATATTTGCGCTGGCAAGGGATCAAGGATCTGGGAATGTGAGGTCACCAAACTCTATCAGTTATAAGATGAAAGACGTTGACGAAAAGAATTTAAACAAAGGACTTGAGAAGGTACTGAGAATTCTTGCGGCAGCTGGAGCTGAAGAAATTGGGACCCATCATGCTAAGGGAAGGACCTTGAATGTAAAGCGGGTGAGCTATCACGAATTTGAAAAGTTTGTAAAAGAGGAAAGTTCAAGGCCATTAACAGACATTGCAACGCCATTAAGTTCAGCGCACCAGATGGGGAGCTGCCGGATGGGTATTAATCCAAAGGAATCAGTGGTGAACCAGATGGGGGAGACATGGGAAGTAGAGGGACTTTATGTGGCAGATGCAAGTGTCTTCCCAACAGCTTTGGGTGTGAATCCAATGCTCACTGTTCAGGCTATTGCTTATTGCACAGCACAATCAGTTCTTGAAGTTCTTAGAAGGAAAAGATCACGATGA 2433 0.4488 MEEHGGSKNSSFRKGSFRLGLGSVNGSKDHTVMELGSIDTQGLLLAGKREKQQQTPLTNSLSLREMKTITAICDTFLPSIDDVVPHASDDSVTTFYRTSASMAGTHNRLGGVISERLKHPNTQLLRLVLWVLSTWYGTFILCGLRSLSLRFPFFHSFPNLPLHKRQLIVRSWSLSYFPHLRMFFKTIKVLTLLLFFTQLDEAEDNPSWKAIGYSGPDPEFKCQLKNQFLQGISKGHEQKEDEDYDAEEVVGPLYKGLVHLNCPQDITVDSLRQRGFPVSFVRRKTKALSLSSPSLVIQCDAVVVGSGSGGGVVAGALAKAGYKVLVLEKGSYCARNNLSLLEGPTMDQMYLSHGFIATDDMRVLILAGSTVGGGSTINWSACIKTPKHVCKEWCNHHKLELFESKLYKEAMDVVSKKMGVQSEITEEGFNNVVLRRGCQEMGYTVSNIPRNSPPDHYCGWCCMGCKDGRKKGASETWLVDLVKSGNGAILPGCEAIKVLHKKKKGRDRKVARGVAFEFEYKGAKDIYVVESEVTIVACGALSTPALLKRSGLKNGNIGRHLHLHPVVMAWGYFPDAPSPEVWPEEQKKSYEGGIMTAMSTVVAEFESSGYGAVIQTPALHPGMFSILMPWVSGIDIKDRMRRFPRTAHIFALARDQGSGNVRSPNSISYKMKDVDEKNLNKGLEKVLRILAAAGAEEIGTHHAKGRTLNVKRVSYHEFEKFVKEESSRPLTDIATPLSSAHQMGSCRMGINPKESVVNQMGETWEVEGLYVADASVFPTALGVNPMLTVQAIAYCTAQSVLEVLRRKRSR 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1150 810 SUPERFAMILY FAD/NAD(P)-binding domain 295 802 IPR036188 -
Glsi05g1150 810 Gene3D - 729 807 IPR036188 -
Glsi05g1150 810 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 58 809 - -
Glsi05g1150 810 Pfam GMC oxidoreductase 300 566 IPR000172 GO:0016614|GO:0050660
Glsi05g1150 810 Gene3D - 287 604 IPR036188 -
Glsi05g1150 810 PIRSF Lg_Ch_AO 47 810 IPR012400 GO:0046577
Glsi05g1150 810 Pfam GMC oxidoreductase 667 795 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1150 Glsi-ChrGlsi05 61170352 61175135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1150 49 804 Acyl Lipid Metabolism Gene Families AT4G19380 59.103 0.0 863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1150 05 61170352 61175135 Glsi05g1150 05 61170352 61175135 ECH