Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1124 ATGCTGAGTCGTGGGGTTAATAGCAGGGTGGCCAACACTGCGTTGGTCGCAGCCGGTGCACGTTTCTTCTCTACAACAGCTCGTGGTGTCGCCGGCGAGTCTCTGTTGACTAGTGCGGCGAAGGGGTTTGGTGGTGATATTGGGGCAAGTAGAGGTAGATGGGTTTATTGGGTAAGGGCTCCTATGTTTCATGGCGGAAGTGGACGGAGTGCGAGCACTTTGACCTTGGGAGAGAAAGAGAAGCAGGAGGAGAAGCAGGGTGTGTCGGATTCAGGCACTAGCAGTGCGGGAGGGAACAAAAACGAGAAGGGGGTCGTGAGTTATTGGGGTATTGAACCCGGTAAGATCATCAAACAGGACGGCACAGAGTGGAAGTGGAATTGCTTTAGGCCGTGGGAGACGTACAAAGCAGACCTTTCGATTGATCTGCAGAAGCACCATGCTCCACTGACATTTATGGACAAGATGGCTTATTGGACCGTCAAGTCTCTCAGATACCCCACTGATTTATTCTTCCAGAGAAGGTATGGATGCCGAGCAATGATGCTTGAGACAGTGGCAGCTGTGCCTGGCATGGTGGGAGGCATGCTACTACACTGCAAGTCGCTGAGGCGATTTGAGCACAGTGGCGGTTGGATCAAAGCGCTGCTAGAAGAAGCTGAAAACGAGCGAATGCACCTAATGACCTTCATGGAGGTGGCCAAGCCAAAGTGGTACGAGCGTGCCCTGGTCATCACCGTCCAAGGTGTTTTCTTCAATGCTTACTTCTTGGGCTATTTGCTGTCTCCTAAATTTGCGCACCGCATGGTTGGGTACCTGGAGGAGGAGGCTATTCACTCCTACACAGAGTTCCTGAAGGAGTTGGACAAGGGCAACATCGAGAACGTTCCAGCTCCGGCTATTGCCGTAGACTATTGGCAGATGCCACCCGACTCCACTTTAAGAGATGTGGTCATGGTTGTCAGAGCTGATGAAGCACACCACCGTGATGTCAACCACTTTGCATCGGATATACATTATCAAGGACGAGAGCTAAGAGAAGCTCCTGCTCCAATTGGTTACCACTAG 1068 0.5178 MLSRGVNSRVANTALVAAGARFFSTTARGVAGESLLTSAAKGFGGDIGASRGRWVYWVRAPMFHGGSGRSASTLTLGEKEKQEEKQGVSDSGTSSAGGNKNEKGVVSYWGIEPGKIIKQDGTEWKWNCFRPWETYKADLSIDLQKHHAPLTFMDKMAYWTVKSLRYPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGVFFNAYFLGYLLSPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAVDYWQMPPDSTLRDVVMVVRADEAHHRDVNHFASDIHYQGRELREAPAPIGYH 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1124 355 CDD AOX 172 339 IPR002680 GO:0009916
Glsi05g1124 355 FunFam Ubiquinol oxidase 108 352 - -
Glsi05g1124 355 Gene3D Alternative oxidase 114 352 IPR038659 -
Glsi05g1124 355 MobiDBLite consensus disorder prediction 69 99 - -
Glsi05g1124 355 PANTHER ALTERNATIVE OXIDASE 16 355 IPR002680 GO:0009916
Glsi05g1124 355 Pfam Alternative oxidase 145 335 IPR002680 GO:0009916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1124 Glsi-ChrGlsi05 60982875 60984940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1124 1 355 Miscellaneous Gene Families AT3G22370 74.033 0.0 551
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1124 05 60982875 60984940 Glsi05g1124 05 60982875 60984940 ECH