Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1118 ATGAGGGAGCCAGTACAAATCATGGAGCTTCAGGCTGCAAAATCACCAGAAGAAGGACCCGGTGACCGGATAGTTGCAGCGAACCCGCCTCCTCCCTCCGCGACTAACATTCACCCCCCACTCGAGCTTGATTCTGACAACCAAGAGAAATTAAGGACTACGGCTAATAGACAAGCTTGTACTGCAATGGGGCAGTACAATGGGGAGACTCTTGGTGGATTACCCTCCCCCAGGGTAAATAACGTGAAGAAGGTTTCAGTTCTTCCTCTCATATTTCTCATCTTCTATGAGGTTTCTGGGGGCCCTTTTGGTGTCGAGGATACTGTACAGGCTGCAGGTCCTCTGTTAGCCCTGCTTGGGTTTTTGATTTTCCCATTCATATGGAGTGTTCCCGAAGCTTTAATCACTGCAGAGATGGGTACCATGTTTCCTGAAAACAGTGGTTATGTGATTTGGGTTTCTTCCGCATTGGGTCCCTATTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTAAGTGGGGTAATTGATAACGCCCTGTACCCAGTTCTTTTTCTGGACTATCTCAAGTCGGGAGTTCCTGCTTTAGGTGGTGGCGTTCCCAGAGCTGTTGCAACCTGGGGTTTGACAATAGTTCTCACCTATTTGAACTATAGAGGCTTAACCATTGTGGGATGGGTTGCGGTTCTTTTAGGGGTTTTCTCACTCCTCCCTTTTGTGGTTATGGGATTTTTGGCAATTCCAGACTTGAAACCTCATAGATGGTTGGTGACGGATCTACATGATGTGGATTGGAATTTGTATTTGAATACTCTTTTTTGGAATCTTAATTATTGGGACTCCATAAGTACTCTTGCTGGAGAAGTGGAAAACCCAAAGAAAACCCTTCCAAAGGCTCTGTTTTATGCATTGATCCTAGTAGTTCTAGGGTATTTCTTTCCGCTTCTAATTGGGACTGGTGCTGTTTCCCTCAATCGTGAGTTGTGGAGTGATGGATACTTCTCAGATATTGCCAAGATCGTTGGAGGAGTGTGGTTGAGATGGTGGCTTCAGGCAGCTGCTGCGACGTCAAACATGGGGATGTTCGTTACAGAAATGAGCAGTGACTCCTTTCAACTTCTAGGGATGGCTGAGAGGGGATTGTTGCCTGAGTTCTTTAGCAAGAGGTCTCGATATGGAACCCCTCTTATAGGAATACTTTTTTCAGCCTCAGGTGTAATATTACTGTCATGGCTGAGCTTCCAAGAAATTGTAGCTGCAGAAAACATATTGTACTGTTTTGGAATGATTTTGGAGTTCATATCATTCATACTGTTGAGGATCAAACACCCCAATGCATCTCGGCCTTACAAGATACCGGGGGGAACAGCTGGAGCAATTCTTATGTGTATACCTCCTACAATATTGATCTGTGTTGTGTTAGCTTTCTCCTCTCTCAAAGTAATCGTTGTAAGCCTCATTGCTGTGGTGATTGGCCTTGTGATGCAGCCTTGTCTCAAATTTGTAGAGAAAAAGAGATGGTTGAAGTTCTCCATTAGTTCAGAGCTCCCAAATCTTGTCAATCAGGAGAGCACTCATTCTTTGATAGAAAGAAGCGAGCAGAAGAGTTTTTCTTTGTTTTCGAAAGGGGGTTCAGCTGAACATTTTCTTCAGTAG 1653 0.4483 MREPVQIMELQAAKSPEEGPGDRIVAANPPPPSATNIHPPLELDSDNQEKLRTTANRQACTAMGQYNGETLGGLPSPRVNNVKKVSVLPLIFLIFYEVSGGPFGVEDTVQAAGPLLALLGFLIFPFIWSVPEALITAEMGTMFPENSGYVIWVSSALGPYWGFQQGWMKWLSGVIDNALYPVLFLDYLKSGVPALGGGVPRAVATWGLTIVLTYLNYRGLTIVGWVAVLLGVFSLLPFVVMGFLAIPDLKPHRWLVTDLHDVDWNLYLNTLFWNLNYWDSISTLAGEVENPKKTLPKALFYALILVVLGYFFPLLIGTGAVSLNRELWSDGYFSDIAKIVGGVWLRWWLQAAAATSNMGMFVTEMSSDSFQLLGMAERGLLPEFFSKRSRYGTPLIGILFSASGVILLSWLSFQEIVAAENILYCFGMILEFISFILLRIKHPNASRPYKIPGGTAGAILMCIPPTILICVVLAFSSLKVIVVSLIAVVIGLVMQPCLKFVEKKRWLKFSISSELPNLVNQESTHSLIERSEQKSFSLFSKGGSAEHFLQ 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1118 550 PANTHER POLYAMINE TRANSPORTER PUT1 79 524 IPR044566 GO:0022857
Glsi05g1118 550 FunFam Amino acid permease, putative 81 510 - -
Glsi05g1118 550 MobiDBLite consensus disorder prediction 1 39 - -
Glsi05g1118 550 Gene3D Amino acid/polyamine transporter I 82 511 - -
Glsi05g1118 550 Pfam Amino acid permease 89 478 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1118 Glsi-ChrGlsi05 60950545 60955449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1118 75 525 Organic Solute Cotransporters AT1G31830 76.497 0.0 726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1118 05 60950545 60955449 Glsi05g1118 05 60950545 60955449 ECH