Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1099 ATGGTGGATTGGTTTGGCTGTAGAAAGCAGCGCCCTTCTCCTCTCTCTCCTTGCAATGATTTCACGAATAAAAAATCTACGTTCTCTCGAATCACAGCACCCTCGCTGAATTTAATACAGAAAAGAGAAGGTGGCTGCTTGGGTGGAAACTACAAGTGGGAGAGGTTTACCCTCATCTTCATTTCGAGTGGCACCATGTCGTCGAAGGTTGTGTATGAAGGCTGGATGGTGCGGTATGGCCGGCGAAAGATCGGCCGATCGTTCATCCACATGAGGTATTTCGTGCTCGAGCCGCGGCTGCTCGCATATTACAAAAGGAAACCACAGGATAATCGGGTTCCTATTAAAACACTGTTAATTGATGGCAACTGTAGAGTGGAGGATAGAGGCCTGAAGACCCATCATGGACATATGGTTTATGTTTTATCTGTTTACAACAAGAAAGAGAAGTACCACCGAATTACGATGGCAGCATTTAACATTCAAGAGGCACTAATGTGGAAGGAAAAAATTGAGAATGTAATTGATCAGCATCAGGGAGCACAGCCTTCAAATGGTAACAAATATATATCTTTTGAGTACAAATCTGGAATGGATAATGGGAGGACAGCTTCTTCCTCGGACCATGAAAGCCAGTTTAGTGCTCAGGATGATGAAGATGATGCTCATCCACATTTGTTAAGGAGGACAACAATGGGAAATGGCCCCCCAGAATCAGTTTTTGACTGGACACGTGAAGTAGATTCAGATTTGTTGGATCAGAGTACCAATCACCAAGCATTTTCAAGAAAGCATTGGCGTCTTTTAGAATGCCAAAATGGACTTCGCATGTTTGAAGAGCTTCTCGAAGTTGATTACCTTCCAAGGAGCTGTAGTAGGGCAATGAAGGCAGTAGGTGTTGTGGAAGCGACATGTGAAGAAATTTTTGAGCTTGTGATGAGCATGGATGGAACGCGGTTTGAGTGGGATTGCACTTTCCAATATGGTAGCTTAGTTGAAGAGGTGGACGGGCATACAGCAATACTTTATCATAGACTTCAGCTGGACTGGTTCCCAATGTTTGTGTGGCCCCGTGATCTTTGCTATGTACGTTATTGGCGTCGAAATGATGATGGAAGTTATGTTGTTTTGTTTCGTTCTAGAGAGCATGAGAATTGCAGTCCACAACCAGGATGTGTTCGGGCACATATTGAGAGTGGAGGATTTAACATTTCCCCATTAAAATCTCGAAACGGGAGGCCAAGGACACAAGTTCAGCATCTTATGCAGATTGACTTGAAGGGATGGGGTGTAGGTTACGTATCTTCATTTCAGCAGCATTGTCTCCGTCAAATGTTAAATAGTGTTGCTGGTTTACGGGAATGGTTTGCCCAAACAGATGAAAGGAATGCTCCTCCACGAATTCCCATTATGGTTAATATGTCCTCAACATCTGTTTCTGCAAAGAAGAGTCAGAAGCTTCATGATTCTTCTGTTAATCCTGCAGCCTCCCTGGATCAAATGAATGCTGCAAATAGAAACTCTGTAATGATGGATGAATACTCTGATGAAGATGAAGATTTTCAAATAGCAGAACCTGAACTAGAGGCATACCCAAGTGGGCTTGAGAATTATGTCAAAAAGACAGCCTTGGAAGAGGAACCAGAAAATAAAATTGACTTGTCCTGCTTTTCGGGTAATTTACGCCGTGATGATCGTGATAATGCTCGTGACTGCTGGAAAATTTCTGATGGAAATAATTTTAGAGTCCGAAGCAAGCATTTTTGTTATGACAAGTCAAAGATTCCTGCAGGGAAACACCTTATGGATCTTGTTGCGGTTGATTGGTTCAAGGACACAAAAAGAATGGATCACGTGGCTAGGCGTCAAGGGTGTGCATCACAAGTTGCATCAGAAAGAGGACTTTTCTCTATGGTCATCAATTTTCAAGTACCTGGGTCAACACAGTATAGTATGGTATTCTATTTTGTGACAAAAGAGTTAGTTCCTGGATCCCTCTTGCAACGTTTTGTTGATGGTGATGATGATTTCCGAAATAGCAGATTCAAGCTCATTCCATCTGTCCCAAAGGGCTCATGGATTGTGCGACAAAGTGTTGGGAGTACTCCATGTTTACTTGGAAAGGCAGTTGATTGCAACTATATTCGTGGTGCCAACTATTTAGAAATTGATGTTGATATTGGTTCTTCTACTGTTGCTAATGGAGTTTTGGGGTTAGTAGTTGGTGTAATTACAACATTGGTGGTCGATATGGCTTTTCTTGTGCAGGCAAATACCACAGATGAATTGCCAGAGCGGCTTATTGGTGCTGTTCGTATTTCTCATTTAATGCTCTCCTCTGCCATAGTCCCGAAACTGGATCCTGATCCATCATAA 2376 0.4268 MVDWFGCRKQRPSPLSPCNDFTNKKSTFSRITAPSLNLIQKREGGCLGGNYKWERFTLIFISSGTMSSKVVYEGWMVRYGRRKIGRSFIHMRYFVLEPRLLAYYKRKPQDNRVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEKYHRITMAAFNIQEALMWKEKIENVIDQHQGAQPSNGNKYISFEYKSGMDNGRTASSSDHESQFSAQDDEDDAHPHLLRRTTMGNGPPESVFDWTREVDSDLLDQSTNHQAFSRKHWRLLECQNGLRMFEELLEVDYLPRSCSRAMKAVGVVEATCEEIFELVMSMDGTRFEWDCTFQYGSLVEEVDGHTAILYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYVVLFRSREHENCSPQPGCVRAHIESGGFNISPLKSRNGRPRTQVQHLMQIDLKGWGVGYVSSFQQHCLRQMLNSVAGLREWFAQTDERNAPPRIPIMVNMSSTSVSAKKSQKLHDSSVNPAASLDQMNAANRNSVMMDEYSDEDEDFQIAEPELEAYPSGLENYVKKTALEEEPENKIDLSCFSGNLRRDDRDNARDCWKISDGNNFRVRSKHFCYDKSKIPAGKHLMDLVAVDWFKDTKRMDHVARRQGCASQVASERGLFSMVINFQVPGSTQYSMVFYFVTKELVPGSLLQRFVDGDDDFRNSRFKLIPSVPKGSWIVRQSVGSTPCLLGKAVDCNYIRGANYLEIDVDIGSSTVANGVLGLVVGVITTLVVDMAFLVQANTTDELPERLIGAVRISHLMLSSAIVPKLDPDPS 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1099 791 SMART START_1 246 458 IPR002913 GO:0008289
Glsi05g1099 791 MobiDBLite consensus disorder prediction 200 220 - -
Glsi05g1099 791 SUPERFAMILY Bet v1-like 249 441 - -
Glsi05g1099 791 SMART PH_update 70 178 IPR001849 -
Glsi05g1099 791 ProSiteProfiles PH domain profile. 69 176 IPR001849 -
Glsi05g1099 791 Gene3D - 64 185 IPR011993 -
Glsi05g1099 791 SUPERFAMILY PH domain-like 67 185 - -
Glsi05g1099 791 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 86 786 IPR045096 -
Glsi05g1099 791 Gene3D - 266 466 IPR023393 -
Glsi05g1099 791 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 573 776 IPR009769 -
Glsi05g1099 791 Pfam START domain 292 435 IPR002913 GO:0008289
Glsi05g1099 791 CDD START 265 434 - -
Glsi05g1099 791 ProSiteProfiles START domain profile. 266 448 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1099 Glsi-ChrGlsi05 60824824 60839737 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1099 05 60824824 60839737 Glsi05g1099 05 60824824 60839737 ECH