Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1071 ATGGATCAAAATGGGGGGAAGAACTGGAGGGAATTGGTGAAGAAGATGCTTCCTCCTGGAGCTTCTCTCCCTGATGAAGCTTCTGATCTTGACTGCTCCATAGCCATGGAATATGAAGGCCCACCAGTTTCATATGAAGTACCAAGAGCTGACCCCCTTAATGGAACTTCACGAGCAGTACCACTTTCTGAATCACAGCGATCAATTACTCGTGTGGGACATCCACTAGAACCAATTCCTCTGCCAGTATCTCGTGTTGCTGGTGTAACAAGTTCTCCTAATCAAAGTCCAAGGATATCGGGAAGTTCAGAATCTGTAGTGTCTGTCTTGCAAAATCCTGACTTTTCTTCTGCTTCACCTTCAGCCTCACCTGGTTCAGTCCATAATCTTCCTAATCAAGTAATTAGTGAACCAAAGAGGGCACCTGTTGTCACTTTTAATACTGTTCATAGATCTGAGAGGAAAGAAGTTGAGGTTGTCAAACCAGTTTATCCAGAATACGTTGGGGTTTCAAAGGAAAGGAAGAAAAAGAGAATCAGAGTTTGTTATAGATGTGGAAAAGGGAAGTGGGAAACTAAGGAATCTTGCCTAGTTTGTGATGCCAAGTATTGCAGCAATTGTGTGCTTCGGGTAATGGGATCAATGCCTGAAGGACGCAAATGCTTAACATGCATTGGTCAACCTATTGATGAATCAAAGCGTCTGAAATTAGGTAAACATTCACGAGTATTGTCTCGACTGCTTAGTCCTTTAGAAGTTAAGCAAATTATGAAAGCAGAGAAAGAATGCTCTGCTAATCAGCTTCAACCAGAGCAGCTGATTGTTAATGGATTTCCTCTGAAGCCAGAAGAGATGGCTGAATTACTTGGATGCACCTTACCTCCATGGAAGCTGAAGCCTGGTAGATATTGGTATGACAAAGAGTCAGGTCTCTGGGGAAAGGGAGGGGAAAAACCTGACAAAATCATAAGTTCAAACTTGAACTTTTCTGGGAAACTTAGCTCAGATGCTAGTAATGGAAACACTGAAGTTTACATCAATGGTCGAGAGATTACAAAACTTGAATTGAGGATACTGAAGCTGGCAAATGTGCAGTGCCCACGTGATACACACTTTTGGGTTTATGATGATGGTCGTTATGAGGAGGAAGGTCAGAATAATATCAGAGGAAACATTTGGGTGAAGGCTTCAACAAGATTTGTTTGCACCCTGTTCTCGTTACCTTTTCCCCAGGGAAAACCTCATGGAGCAAGATATGAGACTAGTAATTATACTACAGTTCCAAATTATCTGGAACAGAAGAAAGTCCAGAAGCTTCTTGTTCTTGGACTTCAAGGATCTGGAACCAGCACCATTTTTAAGCAGGCCAAATTTTTGTATGGGAACAAATTTACTGCGGAAGAGTTACAGGATATCAAGCTGATGATTCAGAGCAACATGTACAAATATCTTAGCATTTTGCTCGATGGAAGAGAACGCTTTGAGGAGGAGGCTGTTTCTAAAATGAATGCACAAAGCTCTCCTGGTCAAACTAGGGGACCAGTTAGAGACAGTGAAGCAATTGAAACTAGTCTATCCATCTATTCCCTCAACCCAAGGCTGAAGCATTTCTCTGACTGGCTTCTGGACATTATAGCTACTGGGGATTTAGATGCATTCTTCCCAGCAGCCACTCGTGAGTATGCACCGTTAGTTGAAGAAGTGTGGAAGGATCCAGCAATACAAGAAACCTATAAAAGAAAAGATGAGCTTCACTTTCTTCCAGATGTGGCAGCGTACTTCTTAAGCCAGGCCGTTGAGATATCCAGCAATGATTATGAACCTTCTGAAAGAGACATTATATATGCAGAAGGAGTTACTCAGGGAAATGGTTTAGCTTTCATAGAATTCTCGCTTGATGACCGTAGCCCAATGTCTGAAACTTATGCAGAGAATCTGGAAGCTCAACCCCCTCCTCTGACCAAGTACCAACTTATAAGGGTGAATGCCAAGGGAATGAATGATGGTTGTAAGTGGGTTGAAATGTTTGAAGATGTTCGAGCAGTGGTCTTCAGCGTTGCCCTAAGTGACTATGATCAGTTGTGGTTTGCCCCAGACAGCAGCAGCAGTGGAACCCTTCTTCAAAACAAGATGATACAAAGCAAGGAGCTATTTGAGACCATGGTCAGGCACCCTTGCTTCAAAGATACTCCTTTTGTATTGATTCTGAACAAGTATGATATCTTTGAGGAAAAGATCAACAGGGTGTCTCTATGTGCCTGTGAGTGGTTCAATGATTTTTGTCCTGTGCCTGCTCATCACAATAACCAGTCTCTGGCACATCAGGCTTACTTCTATGTTGCCATGAAATTCAAGGACCTTTATGCTTCCCTCACCAGTCGAAAACTTTTTGTGTGGCAAGCCCGGGCAAGGGACCGAGTGACTGTTGATGAGGCATTCAAGTACATTAGGGAGGTCCTCAAGTGGGATGAGGAAAAGGATGAGAACTATTATGGTCCACCAGAGGATTCATATTACAGTACTACAGACATAAGCTCATCTCCTTATGTGAGACAAGAATAG 2562 0.4274 MDQNGGKNWRELVKKMLPPGASLPDEASDLDCSIAMEYEGPPVSYEVPRADPLNGTSRAVPLSESQRSITRVGHPLEPIPLPVSRVAGVTSSPNQSPRISGSSESVVSVLQNPDFSSASPSASPGSVHNLPNQVISEPKRAPVVTFNTVHRSERKEVEVVKPVYPEYVGVSKERKKKRIRVCYRCGKGKWETKESCLVCDAKYCSNCVLRVMGSMPEGRKCLTCIGQPIDESKRLKLGKHSRVLSRLLSPLEVKQIMKAEKECSANQLQPEQLIVNGFPLKPEEMAELLGCTLPPWKLKPGRYWYDKESGLWGKGGEKPDKIISSNLNFSGKLSSDASNGNTEVYINGREITKLELRILKLANVQCPRDTHFWVYDDGRYEEEGQNNIRGNIWVKASTRFVCTLFSLPFPQGKPHGARYETSNYTTVPNYLEQKKVQKLLVLGLQGSGTSTIFKQAKFLYGNKFTAEELQDIKLMIQSNMYKYLSILLDGRERFEEEAVSKMNAQSSPGQTRGPVRDSEAIETSLSIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETYKRKDELHFLPDVAAYFLSQAVEISSNDYEPSERDIIYAEGVTQGNGLAFIEFSLDDRSPMSETYAENLEAQPPPLTKYQLIRVNAKGMNDGCKWVEMFEDVRAVVFSVALSDYDQLWFAPDSSSSGTLLQNKMIQSKELFETMVRHPCFKDTPFVLILNKYDIFEEKINRVSLCACEWFNDFCPVPAHHNNQSLAHQAYFYVAMKFKDLYASLTSRKLFVWQARARDRVTVDEAFKYIREVLKWDEEKDENYYGPPEDSYYSTTDISSSPYVRQE 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1071 853 SUPERFAMILY Transducin (alpha subunit), insertion domain 464 616 IPR011025 GO:0007165
Glsi05g1071 853 Gene3D - 466 617 IPR011025 GO:0007165
Glsi05g1071 853 PRINTS Alpha G protein (transducin) signature 732 741 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi05g1071 853 PRINTS Alpha G protein (transducin) signature 438 453 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi05g1071 853 PRINTS Alpha G protein (transducin) signature 606 628 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi05g1071 853 PRINTS Alpha G protein (transducin) signature 679 707 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi05g1071 853 MobiDBLite consensus disorder prediction 113 132 - -
Glsi05g1071 853 Gene3D - 630 829 IPR027417 -
Glsi05g1071 853 CDD G-alpha 437 823 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi05g1071 853 FunFam Extra-large guanine nucleotide-binding protein 3 465 617 - -
Glsi05g1071 853 FunFam Extra-large guanine nucleotide-binding protein 3 631 829 - -
Glsi05g1071 853 ProSiteProfiles G-alpha domain profile. 435 831 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi05g1071 853 MobiDBLite consensus disorder prediction 827 853 - -
Glsi05g1071 853 MobiDBLite consensus disorder prediction 87 106 - -
Glsi05g1071 853 Pfam G-protein alpha subunit 433 819 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi05g1071 853 MobiDBLite consensus disorder prediction 835 853 - -
Glsi05g1071 853 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 433 827 IPR027417 -
Glsi05g1071 853 SUPERFAMILY FYVE/PHD zinc finger 152 225 IPR011011 -
Glsi05g1071 853 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 212 823 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi05g1071 853 MobiDBLite consensus disorder prediction 43 76 - -
Glsi05g1071 853 SMART galpha_1 425 820 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1071 Glsi-ChrGlsi05 60528673 60533987 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1071 05 60528673 60533987 Glsi05g1071 05 60528673 60533987 ECH