Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1069 ATGCAGAAACTGGGCGACTTCAAGCTACCACACTTCTTCAATTATCCACCATACTTCACTCTGCAGCCTGTAAGAGACACCAGAGAGAAGCAGGTGCAACTATGGAAAGATCTTATTCTAGATTACTGCAAAACACAGAAGATATTTGTAATTGGACTTGAGGAAGAATTTCCACTGTTTTCAAATTCTGTGATTGAAAGGTCTCTCAGTCATGAAGCCCGAGCAGCCTTCCTTTCAGCCTTAGTTTCGGAAGGACGTGCAGAATGGATGGACAAAGGACATAGGAAATGTCTTATTCTCTGGCACCGTATTCAAGATTGGGCTGACATTATATTACAATTTGCAAAAGACAATGGATTGGAGGATAGTGTTGTGACAATAGAGGAAATACGCTCTGGGATTGAATCTCAAGGAACAGAGCTTCATGGGATAGACCGCACTATCTTGAATCGTGCTTTGAAACTATTGGAACAGAAGGGAAAGCTTGTTATCTTCAAGGGAACTTCAGCTGATGATGAAGGTGTCAAATTTTCGGTATAA 540 0.413 MQKLGDFKLPHFFNYPPYFTLQPVRDTREKQVQLWKDLILDYCKTQKIFVIGLEEEFPLFSNSVIERSLSHEARAAFLSALVSEGRAEWMDKGHRKCLILWHRIQDWADIILQFAKDNGLEDSVVTIEEIRSGIESQGTELHGIDRTILNRALKLLEQKGKLVIFKGTSADDEGVKFSV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1069 179 Pfam ESCRT-II complex subunit 13 145 IPR008570 GO:0000814|GO:0071985
Glsi05g1069 179 SUPERFAMILY "Winged helix" DNA-binding domain 7 107 IPR036390 -
Glsi05g1069 179 Gene3D - 5 101 IPR014041 -
Glsi05g1069 179 FunFam Vacuolar protein sorting-associated protein 25 5 100 - -
Glsi05g1069 179 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 2 178 IPR008570 GO:0000814|GO:0071985
Glsi05g1069 179 FunFam vacuolar protein-sorting-associated protein 25 100 178 - -
Glsi05g1069 179 SUPERFAMILY "Winged helix" DNA-binding domain 102 177 IPR036390 -
Glsi05g1069 179 Gene3D - 103 178 IPR036388 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1069 05 60516072 60518244 Glsi05g1069 05 60516072 60518244 ECH