Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1059 ATGGAAGCAAAGATCGCAAAGGCGTTGGATAGGGATGTGCTCAATTTGAAACGAAAGCGGGCTACTCGATTTGCTACATATCTGAATGGAGCTTCCCGCTCAGTGTTACCTCATTGGCCATCCTTGACATCGCCAACAAAAAGGTTCATCAAACAGAGGAGGTTGGGTGGATATAAAAGCAAGCATACTAACTATGGGGCTCATTTTAGACAATCTTTACTTAGATGCTATTTGAACTTCAAGAAAAGTGGGAGGCCAGAACGTTTGATGTTTTATAAGAATGGTGAATGGACAGACTTCCCTCGGGATGTAGTTGACTTGGTTAGAAAAGATCTAGAGGTAAAGAAGGAAGCCGTGGAAGTAAAGCTCAATGGCCGTCATCTTGTGCTAGATTTTTTGCACATGTATCAGATGGACTTGAAAACTGGTTCACAGCAACCTATTGCCTGGATTGATGAGACGGGGTGCTGCTTCTTTCCTGAAGTTTATGCTGTTTCTGAAGAAGAGCCATATGTTTTTTCCAAGCAAGATGTTGGAAGAGTTCATGACCCTTTTTGTCAGGAGCCTTATGAATCTAATGAGATAAAATTGCATTTGGAAATTGAAATAAATGGAGTGGATGAATCCAAGTTGAGGGAATGTAGTGGTGAGTCAAATGCTCTAGTTAAGCGTATCCAAGTTGAAGCAAAACGTGCCTGCAATCAATATGATGTAGAAGTTGAAGTTGATGCAAAACATGCCTGCAATCAATATGATGTAGAGGTTGAAGATAGCAGTAATAAGCTGGATAATGCAAATGTTGGTGAAGCTATTGAGCTAAATCAAGAGATAGGTTTAGATACATATACTGAATCTGTAAATGGAAAGCTGGATTTGGATACTGTACAGAATATGTTTGTTAAGGACATGAGTAGATATGGCACAACTGACATAGTGGAGATATACCATTGCTCAAGTACTCTGATGAAAGCACGATTGGAGCTATTCCAGAAGCAGATTGAAATTACAAAGAAGTGCCGTGCTGATGCTAATGTTCGATATGCTTGGCTTGCTTCATCTAAAGGAGAACTCTCTACAATCATGAAGTATGGACTTGGGCATTGTGGTCTATCTGCAACTAAATCCGCATATGGCATTGGTGTTCAACTTGCAGCAGCTAACTGTCCTAACGCCAGTGCAATTTATTGTGATGTTGACGAAAATGGGGTACGGCACATGGTGTTTTGTCGTGTAATAATGGGGAACATGGAGCTTCTCTGCCCTGGCACTAGACAATTTCATCCCAGTAGTAATGACTATGATAGTGGGGTAGATGACGTTCAAAGTCCGAGTTACTATGTAGTGTGGAATATGAATTTGAATACCCACATCTATCCAGAATTCGTTGTTAGTTTCAAAGTTTCTTCTAATGCTGAAGGGACTCTTTTTGGAAGTGAGAATAAGCATAATGTTTCCGGGGTTACTACAGCTTGTCCAGGCCCTCAAGGCTCATTACAATCTGAGTTTTCTACTGTAGATATGAGCATTAGCCAACCAATTTTAGATCGTGGGATACCTCATGGGAAAGCTGCTAGTGTGGCTGCTAGCCCTCCAAGAGCTCCAAAATCCCCTTGGATGCCTTTCCCCATGCTTTTTGCTGCTATTTCAAATAAGGTTCCTCCCAAGGACATGGAGCTTATCAATATACATTATGAACAATTCAGGTCAAAGAAGATAAACCGTGATGATTTTGTGAAGAAGTTGAGGTTGATAGTTGGAGATACTCTGTTGAGAACTACAATAACGAACCTTCAATGCAAGATACCGTCCAAATCGTTATGTGAATCAGAAAAAAGTCAAGCAACTCCAGAAAAGGCTGAGGTTGCCTTTATTTGA 1875 0.4075 MEAKIAKALDRDVLNLKRKRATRFATYLNGASRSVLPHWPSLTSPTKRFIKQRRLGGYKSKHTNYGAHFRQSLLRCYLNFKKSGRPERLMFYKNGEWTDFPRDVVDLVRKDLEVKKEAVEVKLNGRHLVLDFLHMYQMDLKTGSQQPIAWIDETGCCFFPEVYAVSEEEPYVFSKQDVGRVHDPFCQEPYESNEIKLHLEIEINGVDESKLRECSGESNALVKRIQVEAKRACNQYDVEVEVDAKHACNQYDVEVEDSSNKLDNANVGEAIELNQEIGLDTYTESVNGKLDLDTVQNMFVKDMSRYGTTDIVEIYHCSSTLMKARLELFQKQIEITKKCRADANVRYAWLASSKGELSTIMKYGLGHCGLSATKSAYGIGVQLAAANCPNASAIYCDVDENGVRHMVFCRVIMGNMELLCPGTRQFHPSSNDYDSGVDDVQSPSYYVVWNMNLNTHIYPEFVVSFKVSSNAEGTLFGSENKHNVSGVTTACPGPQGSLQSEFSTVDMSISQPILDRGIPHGKAASVAASPPRAPKSPWMPFPMLFAAISNKVPPKDMELINIHYEQFRSKKINRDDFVKKLRLIVGDTLLRTTITNLQCKIPSKSLCESEKSQATPEKAEVAFI 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1059 624 SUPERFAMILY ADP-ribosylation 293 468 - -
Glsi05g1059 624 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 60 600 IPR044964 -
Glsi05g1059 624 Gene3D - 286 470 - -
Glsi05g1059 624 ProSiteProfiles RST domain profile. 532 603 IPR022003 -
Glsi05g1059 624 ProSiteProfiles WWE domain profile. 75 150 IPR004170 -
Glsi05g1059 624 ProSiteProfiles PARP catalytic domain profile. 269 486 IPR012317 GO:0003950
Glsi05g1059 624 Pfam RCD1-SRO-TAF4 (RST) plant domain 533 598 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1059 Glsi-ChrGlsi05 60430765 60439845 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1059 05 60430765 60439845 Glsi05g1059 05 60430765 60439845 ECH