Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1050 ATGTCGATAAAAACTGCTAAAGTCAGTAATGTTTCCTTGGAAGCAACTGAGAAAGACATTAAGGAGTTCTTTTCTTTTTCTGGTGATATTGTATATGTTGAAATGAGGAGTCATGATGAACGGTCTCAAGTCGCCTATGTCACTTTCAAGGATTCACAAGGAGCTGAGACTGCAGTACTACTATCGGGAGCAACAATAGTTGATCAGTCAGTTACAATTACTCTTGATCCAGATTATAAGCTTCCACCTGCTGCCTTGGCATTATCCGCAACGGAAGGTAGAACTCCTCCTGTTGTTACTGACTCTGCTTTAAGAAAGGCAGAGGATGTGGTCACCGGCATGCTGGCCAAGGGCTTTGTCTTAGGGAAAGATGCTGTCAACAAAGCAAAGACTTTTGATGAGAAACATCAGTTATCTTCAACAGCCTCTGCAAAAGTTGCATCTTTTGACCAGAAAATTGGTCTTAGTGAGAAAATATCTGCTGGTGCTTCCGTTGTGAGTGATAGAGTTCGAGAAGTGGATCAAAAGTTTCAGGTTTCAGAGAAAACCAAAACAGCATTTGCAGCTGCAGAACAGAAAGTCAGCGATGCTGGTTCTGCTATTATGAAGAATCGCTACATACTCACTGGGACTTCATGGGTAACAGGTGCTTTCAGTAAGGTTGCTAAGGCAGCTGGGGACGTAGGACAGAAGACAAAGGAGAAAGTGGAGAATTCAGAAGAGAAACAAAACCGATCGTTAGAGGATGGGTATGCCCAGGTTTTATCTGAGTCCCCAAAAGCAACGGCAACGAGTGCACAGCACCCTTCTAAGCCTTCTCCTGCTCAGGGCTTGATCCTTTGA 843 0.4377 MSIKTAKVSNVSLEATEKDIKEFFSFSGDIVYVEMRSHDERSQVAYVTFKDSQGAETAVLLSGATIVDQSVTITLDPDYKLPPAALALSATEGRTPPVVTDSALRKAEDVVTGMLAKGFVLGKDAVNKAKTFDEKHQLSSTASAKVASFDQKIGLSEKISAGASVVSDRVREVDQKFQVSEKTKTAFAAAEQKVSDAGSAIMKNRYILTGTSWVTGAFSKVAKAAGDVGQKTKEKVENSEEKQNRSLEDGYAQVLSESPKATATSAQHPSKPSPAQGLIL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1050 280 Gene3D - 2 74 IPR012677 -
Glsi05g1050 280 MobiDBLite consensus disorder prediction 228 247 - -
Glsi05g1050 280 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Glsi05g1050 280 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 4 243 - -
Glsi05g1050 280 MobiDBLite consensus disorder prediction 257 272 - -
Glsi05g1050 280 SMART rrm1_1 5 74 IPR000504 GO:0003723
Glsi05g1050 280 MobiDBLite consensus disorder prediction 252 280 - -
Glsi05g1050 280 FunFam RNA recognition motif-containing protein 1 74 - -
Glsi05g1050 280 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 66 IPR000504 GO:0003723
Glsi05g1050 280 SUPERFAMILY RNA-binding domain, RBD 5 77 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1050 Glsi-ChrGlsi05 60354942 60358233 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1050 05 60354942 60358233 Glsi05g1050 05 60354942 60358233 ECH