Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1027 ATGCCACTGAGCAACACCGTCATCGGAGCCATCAACTTCATTGCGGTGCTACTCTCAATCCCAATCATTGCTGCTGGAATCTGGCTAACAACAGAGCCAGCAGATTCCTGTGTCCAAATCCTACAATGGCCTGTTATCATCTTGGGGGTTCTGATCTTGGTTGTGGCTCTAGCAGGATTCATTGGAGCTTTTTGGAGAATCTCTTGGCTCCTCATATTTTACCTCGTTGCCATGCTCGTCCTTATTATATTGCTGGTGTGCTTGGTTGTTTTCATCTACATGGTCACCCTCAGAGGCCATGGCAACATTGAACCTAACCGAGCTTACTTGGAATACCATCTTGATGACTTCTCCGGCTGGCTTCGTCGAAGGGTAAGAAGTTCTTACAAATGGGATCGCATCAGAAGTTGCCTTAGCTCATCCAATACGTGTGCTGAGTTGAACCAAAGGTACCGCATGGCTCAGGACTTCTTTAACGCTCATCTCACACCCATGCAGTCAGGGTGCTGTAAGCCACCGACAAAGTGTGGGTACACGTTTGTGAACCCAACGTATTGGATTAGCCCCATCGACACAGCAGCTGATATGGATTGCCTTCAATGGAGCAACGAGCAAACCCAATTATGCTACAACTGCGACTCGTGCAAGGCTGGATTATTGGCAAATCTGAGGAAGGAGTGGAGGAGGGCTAATGTAATATTGATAATTACTGTGGTTGCTTTGATAATAGTGTATTTGATAGGCTGCTGTGCCTTTAGGAATGCCAAAACTGAGGAGCTTTTTCGCAAATACCAGCAAGGCTATACCTGA 810 0.4679 MPLSNTVIGAINFIAVLLSIPIIAAGIWLTTEPADSCVQILQWPVIILGVLILVVALAGFIGAFWRISWLLIFYLVAMLVLIILLVCLVVFIYMVTLRGHGNIEPNRAYLEYHLDDFSGWLRRRVRSSYKWDRIRSCLSSSNTCAELNQRYRMAQDFFNAHLTPMQSGCCKPPTKCGYTFVNPTYWISPIDTAADMDCLQWSNEQTQLCYNCDSCKAGLLANLRKEWRRANVILIITVVALIIVYLIGCCAFRNAKTEELFRKYQQGYT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1027 269 PRINTS Transmembrane four family signature 6 29 - -
Glsi05g1027 269 PRINTS Transmembrane four family signature 38 64 - -
Glsi05g1027 269 PRINTS Transmembrane four family signature 65 93 - -
Glsi05g1027 269 PANTHER TETRASPANIN-8-RELATED 1 258 IPR044991 GO:0009734|GO:0016020
Glsi05g1027 269 Pfam Tetraspanin family 5 251 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1027 Glsi-ChrGlsi05 60192661 60193841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1027 1 269 Miscellaneous Gene Families AT5G46700 73.234 4.71e-142 398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1027 05 60192661 60193841 Glsi05g1027 05 60192661 60193841 ECH