Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0891 ATGGATTTGGTGGCAGACACAAAATCTGGGCACACACGGTTTTATTTCGCTGATGGAAGAAGACAACCTCAATGTAAACAAAAACACACAGATTTGGGAATAGAAACAAGGGAAAGAGATTTCTCAAGCATGTATTTTAGCTGGTGTTTGAGCTCCTCAATCATTTCCTTTCTTGTACATTTTCTTCTTTTTGCTTCTTTGGTTTGCTCTGTTCATTCATCAGAAATGGGCAGCCTCGGAGTTGCCAATCAGACCCTTCGGCCAGAGGAAGAGGTTCAGAAGATGAGGATCATAAGAACTCGTCTTCAGCAGATCAACAAGCCTTCTGTTAAGACAATTCAGAGTCCTGATGGTGATTTCATAGACTGTGTCGTATCTCATCAGCAACCAGCTTTCGATCATCCTATGTTGAAAGGACATAAACCATTGGATCCTCCAGAAAGACCCAGAGGCCATAACCAAATGGGAGCGTCAAGTGAGAATTTCCAGTTGTGGGGCTTGTCTGGTGAATCATGCCCAGAAGGAACGATTCCAATTAGAAGAACAAAAGAACAAGATATTTTAAGAGCTAGTTCTGTTGAAAGATTTGGAAGAAAAATAAGTAGGCGTGTTAGAAGGGACACCAATACAAATGGACACGAGCATGCAGTTGGGTATGTGACTGGAGATCAATATTATGGAGCGAAGGCAAGTATAAACGTGTGGGCACCAAGTGTGGCGAATCAATATGAATTCAGCTTGTCCCAAATGTGGGTGATCTCTGGTTCATTTGGGGACGATCTCAACACTATTGAAGCTGGTTGGCAGGTCAGCCCAGAACTGTATGGGGACAGTTACCCCAGATTTTTTACTTATTGGACGAGTGATGCATATCAAGCAACTGGGTGCTATAATTTACTGTGCTCGGGCTTTGTTCAAACTAACAATAGAATTGCAATTGGAGCTGCAATTTCTCCAACTTCTTCGTATAATGGTGGACAATTTGATATTAGCTTAGTCATTTGGAAGGATCCGAAGCATGGAAACTGGTGGCTTGAATTCGGATCCGGTATCCTAGTCGGGTACTGGCCTTCATTTCTGTTCACCCACCTTAGGGATCATGCAAGTATGGTACAATTTGGTGGGGAAATTGTGAACTCAAATCCTTCCGGGTCTCACACTTCCACCCAAATGGGTAGTGGGCATTTTGCAGGAGAGGGTTTTGGGAAAGCTTCTTATTTTCGGAACTTGCAAATTGTGGATTGGGATAATAGCTTGATTCCCTTGATGAATCTCCGGGTGTTGGCGGATCACCCGAATTGCTATGACATTCAAGGAGGGATTAATAATGTGTGGGGGAATTACTTTTACTACGGTGGACCTGGAAAAAATGTTAGATGCCCTTAA 1386 0.43 MDLVADTKSGHTRFYFADGRRQPQCKQKHTDLGIETRERDFSSMYFSWCLSSSIISFLVHFLLFASLVCSVHSSEMGSLGVANQTLRPEEEVQKMRIIRTRLQQINKPSVKTIQSPDGDFIDCVVSHQQPAFDHPMLKGHKPLDPPERPRGHNQMGASSENFQLWGLSGESCPEGTIPIRRTKEQDILRASSVERFGRKISRRVRRDTNTNGHEHAVGYVTGDQYYGAKASINVWAPSVANQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDSYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLVIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLRDHASMVQFGGEIVNSNPSGSHTSTQMGSGHFAGEGFGKASYFRNLQIVDWDNSLIPLMNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGKNVRCP 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0891 461 FunFam Putative carboxyl-terminal proteinase 234 353 - -
Glsi05g0891 461 Pfam Neprosin activation peptide 112 219 IPR025521 -
Glsi05g0891 461 Pfam Neprosin 243 454 IPR004314 -
Glsi05g0891 461 Gene3D - 237 350 - -
Glsi05g0891 461 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 96 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0891 Glsi-ChrGlsi05 59156277 59159475 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0891 05 59156277 59159475 Glsi09g1022 09 7144147 7147233 CCT
Glsi05g0891 05 59156277 59159475 Glsi05g0891 05 59156277 59159475 ECH