Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0866 ATGATTATTAATATTCTTCCTTCTTCTGTCTCACATCTATCTCTGATTTCTGTTACTGGATCTCAAAGCGTACATCTCCAAAGGGATCCACAGGCTGAAAAAGAAATGGGGTTGACATTCACTAAGCTTTTCAGTCGGCTTTTTGCCAAGAAAGAAATGCGAATTTTGATGGTTGGTCTTGATGCTGCTGGTAAGACCACTATCCTGTACAAGCTCAAGCTTGGAGAGATCGTCACTACAATTCCTACCATAGGGTTCAATGTGGAGACTGTGGAATACAAAAACATTAGCTTCACTGTTTGGGATGTTGGTGGCCAGGACAAGATTCGTCCCTTGTGGAGGCATTATTTCCAGAACACACAGGGTCTTATATTTGTTGTAGACAGCAATGACAGGGATAGAGTAGTTGAGGCCAGAGATGAGTTGCATAGGATGTTGAATGAGGATGAACTGAGAGATGCAGTATTGCTTGTATTTGCTAACAAACAAGATCTTCCTAATGCAATGAATGCTGCTGAGATCACTGACAAGCTGGGTCTCCACTCTCTCAGGCAGCGTCACTGGTACATCCAGAGCACCTGTGCAACCTCTGGGGAAGGCCTTTATGAGGGTTTGGATTGGCTTTCCAACAACATAGCCAACAAGGCCTAA 651 0.4378 MIINILPSSVSHLSLISVTGSQSVHLQRDPQAEKEMGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0866 216 PANTHER ADP RIBOSYLATION FACTOR-RELATED 36 211 IPR024156 GO:0005525
Glsi05g0866 216 SMART rab_sub_5 53 215 - -
Glsi05g0866 216 SMART arf_sub_2 36 216 - -
Glsi05g0866 216 Gene3D - 39 216 IPR027417 -
Glsi05g0866 216 SMART sar_sub_1 36 212 IPR006689 GO:0003924|GO:0005525
Glsi05g0866 216 CDD Arf1_5_like 53 211 IPR045872 GO:0003924
Glsi05g0866 216 ProSiteProfiles small GTPase Arf family profile. 46 212 - -
Glsi05g0866 216 NCBIfam small GTP-binding protein domain 51 191 IPR005225 GO:0005525
Glsi05g0866 216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 214 IPR027417 -
Glsi05g0866 216 PRINTS GTP-binding SAR1 protein signature 54 77 IPR006689 GO:0003924|GO:0005525
Glsi05g0866 216 PRINTS GTP-binding SAR1 protein signature 154 175 IPR006689 GO:0003924|GO:0005525
Glsi05g0866 216 PRINTS GTP-binding SAR1 protein signature 82 106 IPR006689 GO:0003924|GO:0005525
Glsi05g0866 216 PRINTS GTP-binding SAR1 protein signature 109 134 IPR006689 GO:0003924|GO:0005525
Glsi05g0866 216 Pfam ADP-ribosylation factor family 40 212 IPR006689 GO:0003924|GO:0005525
Glsi05g0866 216 FunFam ADP-ribosylation factor 1 36 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0866 Glsi-ChrGlsi05 58976940 58980822 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0866 05 58976940 58980822 Glsi05g0866 05 58976940 58980822 ECH