Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0859 ATGTGTCAGGAGTCTATTGAAGAAAAAGATAATGTCCCTGCTCTTGACGTTTATGGTAGTTCTTGTGACAGAAAATGCACAGTCGTTTTAGGATTTCTAGAACAATTTGTACAGGTTACCAGTATAACCAGGATCTACGTTTTCTACCATGCAATATTGATTCGTTCTGTTTGGGTGCAATGCAGCTTAATGACCACCAACGAAAAAACAGCTGGGATTTCATCTTTCAGAATTCAGGATTCAAGTATTAGTTGGTGCCCGCTGGAATTTTGTTATCAGGTTTCTGTTAAGCAAGCCAACAAATACTCCTTGCATAAAGTTACTCAGTCTTCACCTTCTCCTGTACTCTCTTTTGTGGAGAGAGTGCCTCAAGATACACAAGCTTCTCATGTAACAGCTGTTGATTCAGAACACGGATACCCAGAGTCAAAAAATGAGTCAACTTCATCTAAGACCATACGAGATGTACATATTTCTATGCGGTTAATGGAGGACTTTCTTGAGCTTGCTAAAGAAAATACAGAAAAAGATCTGGAAACATGTGGTATTCTCGGTGCCTTCCTTGAGAAGGGAACCCTCTATATGACCACTTTGATCATACCAAAACAAGAATCAACTTCCAATTCTTGCCAGGCTACAAACGACGAGGAAGTTTTTGCAATTCTAAATGAAAGATCCCTTTTCCCTGTGGGATGGATCCATACCCATCCTTCTCAAAGTTGTTTCTTGTCATCGGTGGATCTGCACACCCAATATTCATATCAGGCGATGGTTCCCGAGGCTTTTGCCATTGTCCTGGCTCCTAATGATACTTCAAGGAGCTGCGGACTCTTTCGCATAAATGACCCTGATGGGATGAGTATTCTGAAAAATTGCCAAGAGAAGGGATTTCATGCACATAAAGAACCAGATAATGGGAGTCCCGTGTACGAGCAGTGCTCCAATATGTACAAAAACTCCAATCTGAGGTTTGAAATCTTTGATTTGCGCTGA 993 0.4109 MCQESIEEKDNVPALDVYGSSCDRKCTVVLGFLEQFVQVTSITRIYVFYHAILIRSVWVQCSLMTTNEKTAGISSFRIQDSSISWCPLEFCYQVSVKQANKYSLHKVTQSSPSPVLSFVERVPQDTQASHVTAVDSEHGYPESKNESTSSKTIRDVHISMRLMEDFLELAKENTEKDLETCGILGAFLEKGTLYMTTLIIPKQESTSNSCQATNDEEVFAILNERSLFPVGWIHTHPSQSCFLSSVDLHTQYSYQAMVPEAFAIVLAPNDTSRSCGLFRINDPDGMSILKNCQEKGFHAHKEPDNGSPVYEQCSNMYKNSNLRFEIFDLR 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0859 330 ProSiteProfiles MPN domain profile. 156 286 IPR037518 -
Glsi05g0859 330 SUPERFAMILY JAB1/MPN domain 156 284 - -
Glsi05g0859 330 PANTHER AMSH-LIKE PROTEASE 67 330 - -
Glsi05g0859 330 Gene3D Cytidine Deaminase, domain 2 133 330 - -
Glsi05g0859 330 FunFam AMSH-like ubiquitin thioesterase 2 136 330 - -
Glsi05g0859 330 SMART pad1_6 155 283 IPR000555 GO:0005515|GO:0008233|GO:0008237
Glsi05g0859 330 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 153 260 IPR000555 GO:0005515|GO:0008233|GO:0008237
Glsi05g0859 330 CDD MPN_AMSH_like 153 330 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0859 Glsi-ChrGlsi05 58935149 58938903 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0859 05 58935149 58938903 Glsi05g0859 05 58935149 58938903 ECH