Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0855 ATGCAGGTTGGGTTCGCCGGCGCCGTTGGGATTTCCAGTGATGCGGAGGCCGTGGGGAAAAACCCATTTACCCCAAAGGCTTTCTTGATTCGGTATTGGGACAAAGAGATCCGCAACAACTTATCAAAACCGTCGTTCCTGCTCTCGAAGGCGTCGCCATTAGGCACCGTGGACTCGGCGGCGTTTGCCAAACTTGCCGCCAGCAACGCCCTGTCCACGCGCCTCCCCGAATTCTGCTCCTCCGCGAACCTCCTCTGTATCCCTGATTTGGGACCCAGCTTGGAGAAGCACGATAAAGATTCCAACTTTGCTGTGTATCAGGACAAGAACTTCACCAATTACGGAACGGATCGACTCGGCGGAAAGGACACTTTCAAGAACTACTCGGATGGTGAGAATATCCCGGTGAACGATTTCCGGCGGTATAGCCGTGACTCCATCGGTCACAAAGATAATTTTCTCAGCTACGGCTCCAATGGCAACGTGGTGGACCAGAGCTTTCACACCTACGCTGCCGGAGCCACGGGCGGGGCTGGCGAGTTCAAGCGGTACTCCGATTCAGTCAATGTCCCCAACCTCCGATTCACTTCCTACTCCGACGATTCCAACGGGAGGGAGCAATCGTTCTCCAGTTACACAGAGAATGGAAATGCAGGGGACCAATCATTCACCAACTATGGGAAGCACGGCAATGGGGCTGGGAACGACTTCACAAGCTACGGGACAAACTCGAACGTTGTTGGGTCTGGATTCTCGAATTACGGTCAGATTGGGAATGCTGCGAATGATACATTCACGAATTACGGGGTAAACATGAACAACCCCACCAATACCTTCAGGAACTATGGAGATGGCGGCAATGGAGCCTCTGATAGCTTCGCTAATTACAGAGACCAAGCTAATGTGGGGGAAGATTCGTTCCAATCCTATGCTAAGAATTCCAACGCTGCAGAAGTTGATTTCGCGAACTACGGGAAATCCTTCAATGAAGGTACAGACAAGTTCACTGGGTATGGTAACGGAGCTCAGGACCACAAGGTCGGGTTCAAGGGCTATGGGGTGAACAATACCTTCAAGGACTACGCAAAAGAGGGTGTCACATTCACAAGGTACACCAATGTGAGCTCTACGCTCAGTGCCTCCATGGCGAAAACTGCTGCTTCTGGTGTCAGTGGCAGTTTGGTAAAAAAGTGGGTAGAACCGGGCAAATTCTTTCGGGAGTCGATGCTGAAGGAAGGGACGGTGATGCCTATGCCGGACATTACAGATAAAATGCCCAAAAGGTCGTTTTTGCCCCGATCTATTTTGTCGAAATTACCGTTTTCCGCCTCCAAGATCTCTGAGCTGAAGCAAATCTTCAAGGTGTCTGATAATTCATCCATGGACAAGATTCTTATGGGTTCGTTGAGTGAGTGCGAGAGGGCGCCGAGCCCGGGTGAGACCAAGAGGTGCGTAGGCTCGATCGAGGACATGATCGACTTCGCCACTTCGGTGCTGGGTCGCAACATCGCGGTTCGAACCACCCTGAACGTAAATGGGTCAAAGAAGAAGGTGATGGTGGGTTCGATCGACAAAATCAACGGCGGTAAAGTCACCCAATCCGTCTCATGCCATCAGAGCCTGTTCCCGTACCTCCTTTACTACTGTCACTCGGTTCCCAAGGTTCGGGTGTACGAAGCGGATCTTTTAGACCCGGAGAGCAAGGCGAAGATCAATCGTGCTGTTGCCATCTGTCACTTGGATACAACAGCTTGGAGTCCGTCTCACGGTGCTTTCTTGGCTCTTGGATCGGGTCCGGGTCGGATCGAGGTTTGCCACTGGATCTTCGAGAATGACATGACCTGGACCATCGCCGACTAA 1860 0.5194 MQVGFAGAVGISSDAEAVGKNPFTPKAFLIRYWDKEIRNNLSKPSFLLSKASPLGTVDSAAFAKLAASNALSTRLPEFCSSANLLCIPDLGPSLEKHDKDSNFAVYQDKNFTNYGTDRLGGKDTFKNYSDGENIPVNDFRRYSRDSIGHKDNFLSYGSNGNVVDQSFHTYAAGATGGAGEFKRYSDSVNVPNLRFTSYSDDSNGREQSFSSYTENGNAGDQSFTNYGKHGNGAGNDFTSYGTNSNVVGSGFSNYGQIGNAANDTFTNYGVNMNNPTNTFRNYGDGGNGASDSFANYRDQANVGEDSFQSYAKNSNAAEVDFANYGKSFNEGTDKFTGYGNGAQDHKVGFKGYGVNNTFKDYAKEGVTFTRYTNVSSTLSASMAKTAASGVSGSLVKKWVEPGKFFRESMLKEGTVMPMPDITDKMPKRSFLPRSILSKLPFSASKISELKQIFKVSDNSSMDKILMGSLSECERAPSPGETKRCVGSIEDMIDFATSVLGRNIAVRTTLNVNGSKKKVMVGSIDKINGGKVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPESKAKINRAVAICHLDTTAWSPSHGAFLALGSGPGRIEVCHWIFENDMTWTIAD 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0855 619 Pfam BURP domain 404 616 IPR004873 -
Glsi05g0855 619 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 17 619 - -
Glsi05g0855 619 MobiDBLite consensus disorder prediction 195 227 - -
Glsi05g0855 619 SMART BURP_2 402 618 IPR004873 -
Glsi05g0855 619 ProSiteProfiles BURP domain profile. 404 618 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0855 Glsi-ChrGlsi05 58899758 58901617 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0855 05 58899758 58901617 Glsi09g1069 09 7451831 7453084 CCT
Glsi05g0855 05 58899758 58901617 Glsi05g0855 05 58899758 58901617 ECH