Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0768 ATGAAGAGAGGGAAATCAGAGCCATGGGTGCTGCTTAACAGGCTTCGACTGCTTCAAATTTTGATGGGTGTAATCTTGCTTTGTTTGCTGTTCATGAGCTTCGAAATCCCGCTTGGTTTCAGAGCAGGGGTTGGGTCAGTTTCCTCTGACGGTGCTTTTAGGTTTCTGAGTGACACCTTGCCCAATCCTTTGATGCTCGAGAGTGAAGAGGAGCTCACTACTAGCAGCGCCGCAATTCGGCCTTCAGAGGAAGCTTTCTGGGTTTCTCAAGAATCACTGTACCGAAAACCCGAGAGGCAGATGCACGAGTTGAAGAAAATTTCCGGCTTGGTCTTCAACGAGAGTTTATCTGACAGTAATGCTGCTAAAGATGGGTTTTCTGAACTTCACAAGGCAGCAAGGCATGCTTGGGTAGTGGGAAAGAAGCTCTGGGATGAAGTAGAGAGTGGGAAAACTGAGAATAACACAAAGCCGAAAGCTGAGAACCGTTCCGACTCGTGCCCACACTCGATTTCGCTATCTGGTTCTGAATTTCGGGAGCGGAAAGGGGTAATGGTACTTCCCTGCGGGTTGACGCTGTGGTCGCACATTGCTGTTGTTGGGACGCCGCGTTGGGCTCACGCAGAGTACGATCCAAAGATATCGGTGCTGAAGGAAGGTGATGACTCAGTGATGGTATCGCAGTTCATGATGGAGTTAAAGGGGTTGAAGACTGTGGACAAAGAGGAGCCACCGAGGATTCTGCATTTCAATCCAAGGTTGAAGGGGGATTGGAGTGGGAAACCGGTAATTGAGCAGAATACTTGCTACAGGATGCAATGGGGTTCTGCCCTCAGATGTGAGGGGTGGAAGTCTCGGGCGGATGAAGAAACTGTTGATGGTCAGGTGAAGTGTGAAAAGTGGATTCGTGATGATGACAACCACTCAGAAGAGTCGAAGGCGGCATGGTGGTTGAACAGACTGATAGGGCGAAAGAAGAAGGTGACTGTAGATTGGCCGTATCCTTTTGCTGAGGGGAAATTATTTGTCCTCACCTTAGGTGCTGGCCTTGAAGGTTACCATGTCAGTGTGGGTGGGAAGCATGTGACATCTTTTCCCTATCGCACAGGATTCACTCTTGAGGATGCTACTGGACTATCTATAAATGGAGACATTGATGTGCACTCTGTGTTTGCTGCTTCCTTACCTACATCACACCCAAGTTTTGCCCCACAGATGCATCTTGAGATGCTTCCTCAATGGATAGCTCCACCTCTCCTTCATGTGAATGTGGAGCTTTTCATTGGCATCCTTTCCGCTGGCAACCATTTTGCTGAACGGATGGCAGTGAGGAAGTCCTGGTTGCAACACAAGTTAATCAAATCTTCACATGTTGTGGCTCGATTCTTTGTAGCCTTGAATGGAAGGAAGGATATAAATAAGGACATAAAGAAAGAAGCAGAGTATTTCGGTGATATCATTATAGTCCCATACATGGATCATTATGACCTTGTTGTGTTGAAGACCATAGCTATCTGTGAATATGGGATTCGTTCAGTGGCTGCTGAGTATATTATGAAGTGTGATGATGACACATTTGTCAGGGTTGATTCTGTCATCACTGAAGCAAGAAAAGTTCAAAAAGATAGAAGTCTCTACATTGGAAATATGAATTACCACCATAGGCCCCTTCGCCACGGCAAGTGGGCAGTAACATATGAGGAATGGCTGGAGGAAGAGTATCCTACCTATGCTAACGGTCCAGGTTACATAGTCTCATCTGATATTGCTCAGTTCATCGTATCCGAGTTCGAGAAGCACAGATTAAAATTATTCAAAATGGAGGATGTGAGCATGGGAATGTGGGTTGAGCAGTTCAAGACTTCAAGACCAGTAGAATATTTGCACAGCTTGAAGTTCTGCCAATTTGGGTGCATTGAAGATTACTACACTGCACATTATCAATCTCCACGACAAATGACCTGTATGTGGGATAAGTTGCTACATCAAGGAAAAGCCCTCTGCTGCAACATGAGATGA 2019 0.4621 MKRGKSEPWVLLNRLRLLQILMGVILLCLLFMSFEIPLGFRAGVGSVSSDGAFRFLSDTLPNPLMLESEEELTTSSAAIRPSEEAFWVSQESLYRKPERQMHELKKISGLVFNESLSDSNAAKDGFSELHKAARHAWVVGKKLWDEVESGKTENNTKPKAENRSDSCPHSISLSGSEFRERKGVMVLPCGLTLWSHIAVVGTPRWAHAEYDPKISVLKEGDDSVMVSQFMMELKGLKTVDKEEPPRILHFNPRLKGDWSGKPVIEQNTCYRMQWGSALRCEGWKSRADEETVDGQVKCEKWIRDDDNHSEESKAAWWLNRLIGRKKKVTVDWPYPFAEGKLFVLTLGAGLEGYHVSVGGKHVTSFPYRTGFTLEDATGLSINGDIDVHSVFAASLPTSHPSFAPQMHLEMLPQWIAPPLLHVNVELFIGILSAGNHFAERMAVRKSWLQHKLIKSSHVVARFFVALNGRKDINKDIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIRSVAAEYIMKCDDDTFVRVDSVITEARKVQKDRSLYIGNMNYHHRPLRHGKWAVTYEEWLEEEYPTYANGPGYIVSSDIAQFIVSEFEKHRLKLFKMEDVSMGMWVEQFKTSRPVEYLHSLKFCQFGCIEDYYTAHYQSPRQMTCMWDKLLHQGKALCCNMR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0768 672 FunFam Hydroxyproline O-galactosyltransferase GALT2 307 391 - -
Glsi05g0768 672 FunFam Hydroxyproline O-galactosyltransferase GALT4 182 300 - -
Glsi05g0768 672 Gene3D - 419 658 - -
Glsi05g0768 672 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 402 622 IPR002659 GO:0006486|GO:0016020|GO:0016758
Glsi05g0768 672 FunFam Hydroxyproline O-galactosyltransferase 417 660 - -
Glsi05g0768 672 Pfam Galactoside-binding lectin 184 391 IPR001079 GO:0030246
Glsi05g0768 672 Gene3D - 219 391 - -
Glsi05g0768 672 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 183 393 IPR001079 GO:0030246
Glsi05g0768 672 MobiDBLite consensus disorder prediction 148 164 - -
Glsi05g0768 672 CDD GLECT 187 391 IPR001079 GO:0030246
Glsi05g0768 672 MobiDBLite consensus disorder prediction 148 169 - -
Glsi05g0768 672 Pfam Galactosyltransferase 439 622 IPR002659 GO:0006486|GO:0016020|GO:0016758
Glsi05g0768 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 186 391 IPR013320 -
Glsi05g0768 672 SMART Gal_bind_lectin_2 187 392 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0768 Glsi-ChrGlsi05 58166132 58170149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0768 16 672 Glycosyltransferase AT1G74800 63.079 0.0 863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0768 05 58166132 58170149 Glsi05g0768 05 58166132 58170149 ECH