Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0715 ATGTTATCTATTGCTTGCAGGGTCTGTCTCCCAAATTCCTTTGACAAAGAATGCCTCACGGGGCCTAACATTCAAATTCGTGCTTGCAAAACGGGTCTACTCTGCGACCAAATTGTGGCACCGCTAAGGGAAAGGAGTCTCTCTCTGTGGCGCTTCTTCTGCAAATATTTTCAGCCATCTTTCTTCTCTCTTCGAGCTGAAACCGTGTCATTAGCAGTGTTGATTCGTTGTCATGGTGTCGCAAGACTAGTGGCACGCTTTAGGAAATCAACTTGCAAACATATTGGAAACATGTATTCTGGTGGATACACTATTGAAGTTACAGGTTTATCACCAAAAGCCACGGAGAAAGATGTCTATGACTTTTTTGCTTTCTCTGGTGCAATTGAGCATGTTGAAATTGTCAGGTCTGGTGACTATTATGCCTGCACTGCTTATGTGACATTCAAAGATGCATACTCTCAAGAAACTGCTTGCTTGCTTAGTGGTGCAACTATTCTAGATCAATCTGTTTGCATAACACGCTGGGGGCAGTATGAAGATGAATTTGATTTTTGGAACAGGCCTTCCAATAGGCATGAGGCGGAAACTGATTCAACTCAACCACAAAGCAGTCAGTTTGTGTCCTCTGCTGGAGAAGCAGTTACTATAGCTCAAGAAGTCGTCAAGACCATGCTGGCAAAGGGATACGTTCTCAGTAAAGACGCATTAGCCAAGGCTAAAGACCTCGATGAGTCTCATCAAGTTTCAGCTACTGTGACAGGGAAGGTTGCTGAGCTTAGCCAGAGGATTGGCCTTACTGATAAGATATCTGCTGGTGTTGATGCTGTTAAATCTGTGGATCAGAAGTATCATGTCTCGGAAACAGCAAAGTCAGCTGCATCAGCAACAGGAAGGTCGGTTGCAGCAGCTGCTAACACTGTGGTAAATAGTAGCTATTTTTCGAATGGCGCCTTGTGGGTGTCTGGCGCTTTAACCCGAGCAGCACAAGCTGCTGCTGATTTGGGCAATCGTAGTGTTAAGCAATGA 1029 0.448 MLSIACRVCLPNSFDKECLTGPNIQIRACKTGLLCDQIVAPLRERSLSLWRFFCKYFQPSFFSLRAETVSLAVLIRCHGVARLVARFRKSTCKHIGNMYSGGYTIEVTGLSPKATEKDVYDFFAFSGAIEHVEIVRSGDYYACTAYVTFKDAYSQETACLLSGATILDQSVCITRWGQYEDEFDFWNRPSNRHEAETDSTQPQSSQFVSSAGEAVTIAQEVVKTMLAKGYVLSKDALAKAKDLDESHQVSATVTGKVAELSQRIGLTDKISAGVDAVKSVDQKYHVSETAKSAASATGRSVAAAANTVVNSSYFSNGALWVSGALTRAAQAAADLGNRSVKQ 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0715 342 Gene3D - 101 174 IPR012677 -
Glsi05g0715 342 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 107 167 IPR000504 GO:0003723
Glsi05g0715 342 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 98 338 - -
Glsi05g0715 342 SUPERFAMILY RNA-binding domain, RBD 98 176 IPR035979 GO:0003676
Glsi05g0715 342 SMART rrm1_1 104 175 IPR000504 GO:0003723
Glsi05g0715 342 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 103 178 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0715 Glsi-ChrGlsi05 57540420 57550420 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0715 05 57540420 57550420 Glsi05g0715 05 57540420 57550420 ECH