Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0711 ATGTTGGAAGGTCGCTCCTGTGTGGTTCCGAGGTTGTTTCCTAGCTCTTGCCAGGCAGAGAACAAGTGGTCTTACATGAGCTATCTGAATGGCAATTGCCCTTTCGATGTTGAAGCAAACGATATAGCTAAGCGGCCAGACATAAACCTCAAAAATGGCAAGCGCCCATTGGATTTCGAAGGAGAGGATGAACCCCAACCAAGGAAGTCTACTAAGATATTGGATTCTGGCAGAACAGTTGAAACAGCTGGACTTGTGTGTGAACAGAAATCTTGTCAGGCTAAGGATTCATTGGATTCATGTTCTGTTCTTTCTCAAATGGATCAGGACAGCTCCACCAATCAGGAACAGAAGTCTTATGAACCTTTGAGTTGTTGCGACACAGCTGAAAAGGTTGGAGTTTGGTCTGACCAGCTATCTGATGAACAAGAGCAGCATCATTCTGATGACCAGCAGCAGCATGCTGGAGATACATTTAATTTTGGTAACCAGCAATCTGATGAGGAGCAGCACCATGCTGGAGATTCATCAGATTCAGGTTCTCTTTTGCCACGGATGAATCGAGACAGCTCAATAGCCTGTCTCAGCCGCTGCTCAAGGTCTGATTATGGTTCTCTGGCCTCACTGAATAGGAGCTTTCGCAACTTAATCCGAAGTGGTGAGCTCTATAAATGGAGGAGACTGAATGGTAACATTGAACACTGGGTTTATTTTTCCTGTGCCCTCCTTGAATGGGAAGCATATGATCCAATTCGCCAACGATGGATGCATTTACCAAGGATGGCTTCCAATGAATGCTTCATGTGTTCAGATAAGGAGTCTCTGGCTGTTGGTACCGAACTTCTTGTATTTGGGAGGGGGATGACCTCCCATGTCATTTACAGATACAGCCTTTTGACAAACTCATGGTCATCTGGAATGAGGATGAACGCTCCAAGATGCTTGTTTGGGTCTGCTAGCCTTGGAGAGATTGCAATTTTAGCCGGTGGATGTGATTCAGAGGGAAGAATTCTGAGCTCGGCTGAACTATACAATTCAGAGACTCAAACATGGGAATTACTCCCAAGCATGCATAAACCCAGGAAAATGTGTTCTGGGGTTTTCATGGATGGAAAATTTTATGTTATTGGGGGAATTGGAGGAAGCGAATCCAAGCTTCTTACATGTGGTGAGGAGTACAATTTACAGACCAGAACGTGGACAGAAATTCCAAACATGTCCCCTGGACGTAGTAGTAGGGGGGTCGAGATGCCTGCAACAGCTGAGGCACCACCTCTGGTTGCTGTTGTAAATAATGAACTCTATGCTGCCAATTATGCTGACATGGAGGTAAAAAAATATGACACAGAAAGAAAATTGTGGCTTACCATCGGGAGATTGCCCGAACGAGCAGTGTCAATGAATGGTTGGGGTCTTGCATTCAGGGCTTGTGGAAACCGACTCATTGTCATTGGTGGACCTAGGACTCACGGCGAGGGTTTTATTGAACTCAATTCTTGGGTGCCCAGCGAAGGACCTCCACAATGGAACCTACTTGCCAGAAAGCGATCTGGTAACTTTGTCTATAACTGTGCTGTTGGGGAGGATGGGGAAGAGTTTCTCAGATTTTACTCAAGCTTGGCTGATGAAAAGTTTTATATTCCAAGGGAGCTCGAGTCTTTCATTTTTATGTTTAAAATTTCAATTGATATTTTCTTCCCTTGA 1704 0.4489 MLEGRSCVVPRLFPSSCQAENKWSYMSYLNGNCPFDVEANDIAKRPDINLKNGKRPLDFEGEDEPQPRKSTKILDSGRTVETAGLVCEQKSCQAKDSLDSCSVLSQMDQDSSTNQEQKSYEPLSCCDTAEKVGVWSDQLSDEQEQHHSDDQQQHAGDTFNFGNQQSDEEQHHAGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNLIRSGELYKWRRLNGNIEHWVYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGRGMTSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILSSAELYNSETQTWELLPSMHKPRKMCSGVFMDGKFYVIGGIGGSESKLLTCGEEYNLQTRTWTEIPNMSPGRSSRGVEMPATAEAPPLVAVVNNELYAANYADMEVKKYDTERKLWLTIGRLPERAVSMNGWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWNLLARKRSGNFVYNCAVGEDGEEFLRFYSSLADEKFYIPRELESFIFMFKISIDIFFP 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0711 567 Gene3D - 238 514 IPR015915 GO:0005515
Glsi05g0711 567 MobiDBLite consensus disorder prediction 138 184 - -
Glsi05g0711 567 SUPERFAMILY Kelch motif 242 524 IPR015915 GO:0005515
Glsi05g0711 567 FunFam F-box/kelch-repeat protein SKIP11 228 514 - -
Glsi05g0711 567 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 173 526 - -
Glsi05g0711 567 SMART kelc_smart 280 323 IPR006652 GO:0005515
Glsi05g0711 567 SMART kelc_smart 324 371 IPR006652 GO:0005515
Glsi05g0711 567 SMART kelc_smart 372 420 IPR006652 GO:0005515
Glsi05g0711 567 Pfam Kelch motif 312 357 IPR006652 GO:0005515
Glsi05g0711 567 Pfam Kelch motif 360 407 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0711 Glsi-ChrGlsi05 57501037 57502900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0711 189 422 EF-hand Containing Proteins AT4G39560 25.957 8.14e-08 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0711 05 57501037 57502900 Glsi05g0711 05 57501037 57502900 ECH