Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0435 ATGGTCAATAGCGAAGGCATGGATACACAACGACTGGCTTCGACAGCGACACCTCTATCAGCCATAGCCGAGGCCTTCGAGCAGCTTGCGAAGAGGCTCAATGGTGAGAAGAACGGGCCCATAGAACAAGAAGAATTTCGGTTGGAAAATTTTCTCCAGGCTTGCTCTCTGGTCTCTGTTCTCTTCAATTGCCTCGGCCTTGTTTTCAAATTCGCTGAATTGGAATACGTCGGCAAGCTACATGGACTTGTGGATGCATCAAAGACATATGACACTCTAGAGGATATACTTGACCTTGATGTTGCAAATGACACAGTGAAAACATCAGGAAGCCTTTCGCGTAGTCTGCGTAGGGTTCGGCAGGGTCTTGAACTCATGAGAGCTATATTCAAACAGTTTTGTTCATCCGATGATAGCTCTCTTAAAGAAGTAGCTTCAACAGCTTATGCACAGGTTTGTGCACCGTATCACTCATGGACAGTAAGAGCAGCTGTATCTGCTGGCATGTATACACTTCCAACAAGAGACCAACTTTTGGCAAGGCTTAATGAAACAGAGTACTCAGCTGAGAAGAAAATGACAAGATACGTCAAAGCCTCAATGCCTGTTATCCAGTACATTGATAACCTGTACCTTTCTCGAAATATAGATTTGGACTGGTGA 663 0.448 MVNSEGMDTQRLASTATPLSAIAEAFEQLAKRLNGEKNGPIEQEEFRLENFLQACSLVSVLFNCLGLVFKFAELEYVGKLHGLVDASKTYDTLEDILDLDVANDTVKTSGSLSRSLRRVRQGLELMRAIFKQFCSSDDSSLKEVASTAYAQVCAPYHSWTVRAAVSAGMYTLPTRDQLLARLNETEYSAEKKMTRYVKASMPVIQYIDNLYLSRNIDLDW 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0435 220 FunFam Accelerated cell death 11 10 220 - -
Glsi05g0435 220 Pfam Glycolipid transfer protein (GLTP) 48 184 IPR014830 GO:0005737|GO:0120009|GO:0120013
Glsi05g0435 220 Gene3D Glycolipid transfer protein 11 220 IPR036497 -
Glsi05g0435 220 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 14 211 IPR014830 GO:0005737|GO:0120009|GO:0120013
Glsi05g0435 220 SUPERFAMILY Glycolipid transfer protein, GLTP 40 220 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0435 Glsi-ChrGlsi05 53911470 53915387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0435 13 220 Acyl Lipid Metabolism Gene Families AT4G39670 62.981 6.49e-98 283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0435 05 53911470 53915387 Glsi05g0435 05 53911470 53915387 ECH