Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0431 ATGGAGGTGGGTCCTCAAGGAGGAAGAAATGAAACAGAACCATACGTGGTGAGGGACCATGAGGCCCCACAGACCCCATCAGAGATTGCCCTTGGTGGAGCTAGTTCTTCTCCCAACGCCACCAAAATTGGCCAAGGTTATCGCTTAATCTCCATTGAAGAGACCCCAGATGGTGGCCTTGTAGGGCACCTCCAAGTCAAGCAGAAGAACAAAATCTATGGTCCTGATATCCCTCTCTTGCAGCTCTACGTAAAGCACGAGACGGAGAATCGTTTGAGGGTACACATTACCGATGCCCAGAAGCAAAGATGGGAAGTACCCTACAATCTTCTGCCAAGAGAGCAACCACCGGCTCTGAAGCAGAGCATTGGAAGGTCGAGGAAGAACCCAATAACAGACTCGGAGTACAGTGGCTCCGAGCTCATCTTCAGCTACACTTCAGACCCCTTTAGCTTTGCGGTGAAAAGGAAGTCAAATGGGCAGACCCTTTTCGATTCAAGCTCGGATCAATCAGACCCATGTGGTGAAATGGTCTTCAAGGACCAGTACCTTGAGATTTCAACCAAATTGCCTAAAGATGCCTCCTTGTATGGGTTGGGAGAGAACACACAGCCACACGGAATCAAACTGTATCCAAATGATCCTTACACTCTATATACCACGGATATATCAGCCATTAATCTCAATGCTGATCTATATGGGTCACATCCAGTATATATGGATCTCAGAAATGCAGGGGGTGAGCCTTCTGCACATGCTGTTCTGTTGCTGAACAGCAATGGAATGGATGTGTTTTACAGAGGAACTTCTCTGACTTACAAGGTTATTGGAGGTGTATTCGATTTTTACTTCTTTGCAGGGCCCACTCCTCTAAATGTTGTTGATCAGTACACTTCCTTAATTGGCAGACCAGCTCCCATGCCTTACTGGGCATTTGGATTCCACCAATGTAGATGGGGTTACCATAACCTATCTGTTGTAGAAGATGTTGTTGAGAATTACAAGAAAGCTCAAATCCCACTTGATGTGATCTGGAATGATGATGATCACATGGATGGGCACAAGGACTTCACACTCAATCCCGTCAACTACCCTCGTCCAAAGCTTCTAGCCTTCCTAGACAAAATACACAGCATTGGTATGAAATACATCGTCATTATTGATCCAGGAATTGGTGTTAACTCTAGTTATGGTGTATATCAAAGGGGCATAGCTAATGATGTTTTTATCAAGTATGAAGGTGAACCCTACTTGGCTCAAGTTTGGCCTGGGGCAGTAAATTTTCCTGATTTTCTTAATCCCATAACAGTTTCTTGGTGGGGTGATGAGATCCGCCGATTCCATGAACTTGTTCCTGTTGATGGCCTATGGATTGACATGAATGAAGCTTCAAATTTCTGTTCTGGAAAGTGTAAAATTCCTAAGGGCAAGCAGTGCCCTTCTGGAACTGGACCAGGATGGGTATGTTGCTTAGATTGCAAAAACATTACAAAGACAAGATGGGATGACCCTCCCTACAAGATAAATGCTTCTGGAATACAGGCTCAAATAGGTTACAAAACCATAGCCACTAGTGCAGTCCACTACAATGGCGTTTTGGAGTATGATGCTCACAGTATTTATGGTTTCTCTCAATCCATTGCCACTCACAAGGCCCTCCAAGGGCTTCAGGGGAAAAGACCATTCATCCTGTCTCGATCCACTTATGTTGGTTCAGGCAAATATGCTGCTCATTGGACTGGTGACAATAAGGGCACATGGGAGGATTTAAGGTACTCCATATCTACAATGCTCAATTTTGGTATCTTTGGGGTGCCAATGGTTGGTTCAGATATATGTGGGTTCTACCCAGCACCCACAGAAGAGCTCTGCAACCGGTGGATTGAAGTAGGTGCTTTCTACCCTTTCTCAAGGGATCATGCAAACTACTACTCACCAAGACAGGAGCTTTACCAATGGGAATCAGTAGCTGAGTCTGCTCGAAATGCTTTGGGTATGAGGTATAAGCTCCTCCCCTACCTGTACACATTGAACTATGAAGCTCATATTAGTGGAGCCCCAATTGCCAGGCCACTTTTCTTCTCATTCCCAAGTTACACTGAATGTTATGGCCTCAGCACCCAATTCCTGCTAGGGAGCAGCCTTATGATTTCTCCAGTGCTTGAGCAGGGAAAAACACAAGTAAAAGCACTCTTCCCACCTGGTACCTGGTACAGTTTGTTTGATTTAACACATACCATTGTATCAAAAGATGGAATCTATGTTACCCTCGATGCACCTCTTCATGTGGTCAATGTGCATTTGTATCAGAACACCATTCTCCCAATACAGCAGGGAGGATTGCTTTCTAAGGAAGCGAGATTGACACCCTTTAGCCTCGTGGTGACACTGCCGGCTGGGGCAACCGAAGGGGAAGCTAAAGGGAATCTCTACCTCGATGATGATGAGCTGCCCGAGATGAAGCTCGGAAATGGCTATTCAACGTACGTAGATTTCTATGCAACTCTGAAACAAGGAGATGTGAAGATTTGGTCACAAGTGCAAGAGGGAAAGTTTGCTTTAGATAAGGGTTTGGTTATTGAGAAGCTAACTGTGTTGGGATTAGGTGGAAATGGTGCGCCATATGCACTTGAGATTGATGGGAAACCAGTGGTGGCTGCCTCTGATGTGGAGGTTAGTACATTGGAACAAAAGTACTTGCCAAAAGGGCAAGGAGACGGAGAGAAGAAGACAGTGATGGTAGAGGTGAAGGGCTTGAAAATCCCTGTGGGTAAAAATTTTGCTATGAGCTGGAAAATGGGGATCACAGGTTGA 2814 0.4534 MEVGPQGGRNETEPYVVRDHEAPQTPSEIALGGASSSPNATKIGQGYRLISIEETPDGGLVGHLQVKQKNKIYGPDIPLLQLYVKHETENRLRVHITDAQKQRWEVPYNLLPREQPPALKQSIGRSRKNPITDSEYSGSELIFSYTSDPFSFAVKRKSNGQTLFDSSSDQSDPCGEMVFKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPNDPYTLYTTDISAINLNADLYGSHPVYMDLRNAGGEPSAHAVLLLNSNGMDVFYRGTSLTYKVIGGVFDFYFFAGPTPLNVVDQYTSLIGRPAPMPYWAFGFHQCRWGYHNLSVVEDVVENYKKAQIPLDVIWNDDDHMDGHKDFTLNPVNYPRPKLLAFLDKIHSIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPITVSWWGDEIRRFHELVPVDGLWIDMNEASNFCSGKCKIPKGKQCPSGTGPGWVCCLDCKNITKTRWDDPPYKINASGIQAQIGYKTIATSAVHYNGVLEYDAHSIYGFSQSIATHKALQGLQGKRPFILSRSTYVGSGKYAAHWTGDNKGTWEDLRYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPYLYTLNYEAHISGAPIARPLFFSFPSYTECYGLSTQFLLGSSLMISPVLEQGKTQVKALFPPGTWYSLFDLTHTIVSKDGIYVTLDAPLHVVNVHLYQNTILPIQQGGLLSKEARLTPFSLVVTLPAGATEGEAKGNLYLDDDELPEMKLGNGYSTYVDFYATLKQGDVKIWSQVQEGKFALDKGLVIEKLTVLGLGGNGAPYALEIDGKPVVAASDVEVSTLEQKYLPKGQGDGEKKTVMVEVKGLKIPVGKNFAMSWKMGITG 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0431 937 Gene3D - 670 769 IPR013780 -
Glsi05g0431 937 Pfam N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase 59 192 IPR031727 -
Glsi05g0431 937 SUPERFAMILY Galactose mutarotase-like 44 290 IPR011013 GO:0003824|GO:0005975|GO:0030246
Glsi05g0431 937 CDD GH31_N 184 302 - -
Glsi05g0431 937 CDD GH31_MGAM_SI_GAA 302 682 - -
Glsi05g0431 937 FunFam Alpha-glucosidase 1 670 770 - -
Glsi05g0431 937 SUPERFAMILY (Trans)glycosidases 293 685 IPR017853 -
Glsi05g0431 937 ProSitePatterns Glycosyl hydrolases family 31 active site. 455 462 IPR030458 -
Glsi05g0431 937 Pfam Galactose mutarotase-like 194 262 IPR025887 -
Glsi05g0431 937 Gene3D Glycosidases 304 669 - -
Glsi05g0431 937 Gene3D - 772 936 IPR013780 -
Glsi05g0431 937 FunFam Maltase-glucoamylase, intestinal 304 669 - -
Glsi05g0431 937 FunFam Alpha-glucosidase 1 40 303 - -
Glsi05g0431 937 PANTHER ALPHA-GLUCOSIDASE 61 871 - -
Glsi05g0431 937 Pfam Glycosyl hydrolases family 31 283 774 IPR000322 GO:0004553|GO:0005975
Glsi05g0431 937 Gene3D glycosyl hydrolase (family 31) 40 303 - -
Glsi05g0431 937 MobiDBLite consensus disorder prediction 1 40 - -
Glsi05g0431 937 SUPERFAMILY Glycosyl hydrolase domain 687 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0431 Glsi-ChrGlsi05 53793933 53798757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0431 43 935 Glycoside Hydrolase AT1G68560 77.828 0.0 1481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0431 05 53793933 53798757 Glsi05g0431 05 53793933 53798757 ECH