Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0349 ATGGTACTCTCATCTCATGAGGTTAGAAATGATGATGCTTCACTTGATTCTGGCCATGCCCGTCTTCATGAGCTCGGCTACAAACAAGAGCTCAAGCGTGATCTGTCGTTCATTTCAAATTTTGCGTTTTCATTTTCTATAATTTCAGTGATCACTGGTGTCACCACTCTTTACAACAATGGGTTAAACTTTGGTGGTCCTGTATCTTTGGTGTATGGGTGGTTTATAGCCAGTGCTTTCACCATGTTTGTTGGGTTGTCAATGGCTGAAATTTGTTCATCTTACCCAACTTCTGGTGGGCTTTACTATTGGAGTGCCAAGCTTGCTGGCCCGGGATGGGCACCCTTTGCCTCCTGGATTACTGGCTGGTTCAATATTGTTGGTCAGTGGGCAGTAACAACAAGTGTAGATTTTTCACTTGCACAATTGATTCAGGTTATCATTCTCCTTAGTACCGGTGGGAAAAAAGGTGGTGGATATGAGGCATCCAAGTATGTAATTATCGGTTTGCATGGGGGAATTTTGCTCCTACATGCTATTATAAACAGCCTTCCTATCTCATTGTTATCATTCTTTGGGCAGTTAGCTGCTATTTGGAATGTTGTAGGTGTATTCGTGCTTATGATTCTCATTCCATCTGTTGCGACTGAAAGAGCCAGTGTCAAGTTTGTTTTCACTCATTTCAATACTGATAATGGGGATGGAATTGGCAGCAGGGCATACATATTTCTCCTGGGACTTCTAATGAGTCAGTATACCCTAACTGGATATGATGCATCCGCTCATATGACAGAGGAAACCAAGGATGCTGACAGAAATGGACCAAAAGGAATTATCAGTTCCATTGGGATATCTATTATTGTTGGATGGGGTTACATACTTGGCATTACCTTTGCAGTTACCGACATTCCTTACCTTTTGAGTGAAGATAACGATGCTGGTGGGTATGCCATTGCTGAAATATTTTATCAAGCATTCAAGAGAAGGTATGGCAGTGGAGTTGGGGGCATTATTTGCTTGGGAGTGGTTGCTGTTGCCATATTTTTCTGTGGTATGAGTTCTGTTACCAGCAACTCAAGGATGGCTTATGCTTTCTCCAGAGATGGTGCCATGCCATTATCATCATTATGGCATAAAGTTAATAAGCAGGAAGTCCCCATAAATGCAGTTTGGCTTTCTGCTTTTATATCATTTTGCATGGCGCTAACGTCTCTTGGAAGCACAGTGGCATTTGACGCCATGGTGTCCATAGCAACAATTGGCCTCTATATTGCTTATGCCCTTCCTATCTTCTTTAGGGTGACTTTGGCACACAAGTCTTTCATCCCAGGGCCATTCAACTTGGGCCGCTATGGGATCATTGTTGGCTGGGTTGCAGTTCTTTGGGTGGTGACCATCTCCATCCTCTTCTCATTGCCTGTTTCTTACCCAATAACTATTGAGACACTCAACTACACCCCAGTTGCAGTTGGATGTTTGTTGGTTCTTATAGTTTCTTACTGGATATTGAGTGCTCGGCATTGGTTTAGAGGCCCTATAACCAATATAAACAACTGA 1557 0.4277 MVLSSHEVRNDDASLDSGHARLHELGYKQELKRDLSFISNFAFSFSIISVITGVTTLYNNGLNFGGPVSLVYGWFIASAFTMFVGLSMAEICSSYPTSGGLYYWSAKLAGPGWAPFASWITGWFNIVGQWAVTTSVDFSLAQLIQVIILLSTGGKKGGGYEASKYVIIGLHGGILLLHAIINSLPISLLSFFGQLAAIWNVVGVFVLMILIPSVATERASVKFVFTHFNTDNGDGIGSRAYIFLLGLLMSQYTLTGYDASAHMTEETKDADRNGPKGIISSIGISIIVGWGYILGITFAVTDIPYLLSEDNDAGGYAIAEIFYQAFKRRYGSGVGGIICLGVVAVAIFFCGMSSVTSNSRMAYAFSRDGAMPLSSLWHKVNKQEVPINAVWLSAFISFCMALTSLGSTVAFDAMVSIATIGLYIAYALPIFFRVTLAHKSFIPGPFNLGRYGIIVGWVAVLWVVTISILFSLPVSYPITIETLNYTPVAVGCLLVLIVSYWILSARHWFRGPITNINN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0349 518 NCBIfam amino acid permease 22 512 IPR004756 GO:0006865|GO:0016020
Glsi05g0349 518 ProSitePatterns Amino acid permeases signature. 65 96 IPR004840 GO:0006865|GO:0016020|GO:0055085
Glsi05g0349 518 PANTHER AMINO-ACID PERMEASE BAT1 10 516 - -
Glsi05g0349 518 Gene3D Amino acid/polyamine transporter I 29 509 - -
Glsi05g0349 518 Pfam Amino acid permease 35 490 IPR002293 GO:0016020|GO:0022857|GO:0055085
Glsi05g0349 518 PIRSF AA_transporter 21 512 - -
Glsi05g0349 518 FunFam Amino-acid permease BAT1 29 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0349 Glsi-ChrGlsi05 51841105 51846982 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0349 82 516 Organic Solute Cotransporters AT2G01170 80.460 0.0 689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0349 05 51841105 51846982 Glsi05g0349 05 51841105 51846982 ECH