Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0319 ATGCTTGCTTCCTCCACCGTAGTCACCGCGATGAGCAGCCTAGCCGAGGAAGACCCGTTACCGAAAGCTGCAAAAGCAGCCGAAGATCTTTACCACCTCCGAGACACTTATTTTCCGGCGAACCCAGATGACAAGATCTCCAAATTGCAAGAACAATCCGATCTCGCTCTGAAACTCCTCGATTCTATTCCTCCTGAACATAGAAAGTCACTTATCCAACGTGCAACATTTGAATACCTGAGAGGGAAGATATTGGATGTCTTTCCTGACTATAGGAAAGAAGCAGAGGATCATTTATCAAAATCTGTTAAGTTAAACCCATCTCTCGCAGATGCATGGTTATGTTTAGGTAACTGCATTTGGAAGAAAGGAGATCTATCTTCTGCAAAAAACTGCCTCAGTCTTGCATTAAGCAAGGGTCCTAACAAGAAGATTCTTTGTCAATTGTCAATGCTTAAAAGAAAAATGTCTCAAGGTGTCGAGAATCAGGCAGAACTTGTTGAGGAAAGCATTCAACATGCTAAGGAAGCCATCACCTTGGATGTCAAGGATGGGAATTCTTGGTATAATCTTGGAAATGCGTGCCTTACTAGTTTTTTTGTCTCCGGAGCTTGGGATCATAGCAAACTTTTACATTGTTTAAAAGCATATCAAAATGCTGAAAAAGATGAAGTAATGAAGTCCAATCCAGATTTGTATTTTAATAGTGCCACTGAAGAACAAGGCAATGATCATGATGAGATCCGTATTGTTTGTGGTGAGATTGACTGGTTGGGTATCTTGGAAGACTCAACCTTTGCGTTTGATGTGGCATATTTGGAGGCAGAAGAGCAAAAGGATGTTAACAAATATCTAGAGAATTATGAGAGGGCCCTTAGTGGATTTGAGGCTGCTGCTTTAAAGGATCCAGGTCTGAATGCTACAGAAGAGGTTCAGAAGATAGTCAACCTACTGGACAAGTTGGAGAATCTTATGAGGGTAAATGTAAGAGCTAAGCGCTTGGCATCCTTGGCCTCGACTTTGGCTGCAACTCATTACCTTATGTTGGAGGGTCTAAACAGAGCAGTAGCAGTAGACGGGAAGGTATTATTCTTTGTTAAGAATGAGATTGTTGCTCCCCTATACTATTTGCTTTGTGACTCAAACCAAACTTGCTTTGTTCTTTCAGTTTATGGTGTACGTAATGATGTGATTAAAGAAGGGGATCAGCTAACGCTGCTTGACCCTTACTTCCGTTATGTCGATTTTTCGTGGAAGGAGAAGCATTACCAGTTCAAGTCTATACGCGTGGATTTCCCTGAACAAATGCTTGTGAATGGAAAAGCTGTGACTCCACAACAGGCTGTTCGTACATCAATATATGCCCAACATAAACCTTGA 1380 0.4167 MLASSTVVTAMSSLAEEDPLPKAAKAAEDLYHLRDTYFPANPDDKISKLQEQSDLALKLLDSIPPEHRKSLIQRATFEYLRGKILDVFPDYRKEAEDHLSKSVKLNPSLADAWLCLGNCIWKKGDLSSAKNCLSLALSKGPNKKILCQLSMLKRKMSQGVENQAELVEESIQHAKEAITLDVKDGNSWYNLGNACLTSFFVSGAWDHSKLLHCLKAYQNAEKDEVMKSNPDLYFNSATEEQGNDHDEIRIVCGEIDWLGILEDSTFAFDVAYLEAEEQKDVNKYLENYERALSGFEAAALKDPGLNATEEVQKIVNLLDKLENLMRVNVRAKRLASLASTLAATHYLMLEGLNRAVAVDGKVLFFVKNEIVAPLYYLLCDSNQTCFVLSVYGVRNDVIKEGDQLTLLDPYFRYVDFSWKEKHYQFKSIRVDFPEQMLVNGKAVTPQQAVRTSIYAQHKP 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0319 459 Coils Coil 314 334 - -
Glsi05g0319 459 Gene3D - 313 458 IPR038645 -
Glsi05g0319 459 SUPERFAMILY TPR-like 80 304 IPR011990 GO:0005515
Glsi05g0319 459 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 28 436 - -
Glsi05g0319 459 Pfam Tetratricopeptide repeat protein 5 OB fold domain 347 451 IPR032076 -
Glsi05g0319 459 Coils Coil 157 177 - -
Glsi05g0319 459 Gene3D Tetratricopeptide repeat domain 15 245 IPR011990 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0319 05 50896149 50904909 Glsi05g0319 05 50896149 50904909 ECH