Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0303 ATGGCTATTCCTTATCCCCATTTCATTGCTTCTGAGAAAGCAGCCATGGAGGCGGGCATTTTGGTGCCTTCCTCACCATCGTCGTCCCTGTCTCCACCCCCTGTGATTCTGACCCAGGACGACCTGAAGAAAATCGCTGCCTACAAGGCCGTCGAGTACGTTGAGTCTGGCATGGTTCTAGGTTTGGGAACTGGGTCCACGGCGAAGCACGCAGTGGACCGAATCGGCGAGCTTTTTCGCCAGGGCAAGCTCAAGAACATTGTAGGAATACCCACGTCGAAGAAGACCCACGAGCAAGCTGTTTCATTGGGGATTCCATTGTCAGATCTCGATTCCCACCCAGTCCTTGATCTTGCAATTGATGGAGCCGATGAAGTCGATCCTTTCTTGAATTTAGTGAAAGGCCGAGGTGGGTCGCTTTTGAGGGAGAAAATGGTTGAGGGTGCTTGCAAGAAGTTCATTGTTATTGTGGATGAGTCCAAGTTAGTAAAGTATTTGGGGGGCAGTGGGCTTGCTATGCCTGTTGAGATTATACCATTTTGCTGGAAATTCACTGCTTCTAGGCTGCAAAAATTGTTTGAGGAGTCAGGTTGTGTTGCTAAGCTGAGGACTTTTGGAGAAAACAATGAACCATCTGTAACTGACAATGGAAATTATGTAGTAGACTTGTATTTTAAGAAGAGTATCGGCGATTTGAAGGTTGCTAGTGATGCAATTCTACAACTTGCGGGCGTTGTGGAGCATGGAATGTTCCTGGACATGGCAACCACGGTCATTGTTGCAGGAGAACTTGGGATAACCGTGAAAAATAAATAG 816 0.4743 MAIPYPHFIASEKAAMEAGILVPSSPSSSLSPPPVILTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELFRQGKLKNIVGIPTSKKTHEQAVSLGIPLSDLDSHPVLDLAIDGADEVDPFLNLVKGRGGSLLREKMVEGACKKFIVIVDESKLVKYLGGSGLAMPVEIIPFCWKFTASRLQKLFEESGCVAKLRTFGENNEPSVTDNGNYVVDLYFKKSIGDLKVASDAILQLAGVVEHGMFLDMATTVIVAGELGITVKNK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0303 271 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 29 270 - -
Glsi05g0303 271 Gene3D - 42 263 - -
Glsi05g0303 271 Hamap Ribose-5-phosphate isomerase A [rpiA]. 39 269 IPR020672 GO:0004751|GO:0009052
Glsi05g0303 271 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 88 263 IPR004788 GO:0004751|GO:0009052
Glsi05g0303 271 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 171 252 - -
Glsi05g0303 271 Gene3D - 165 249 - -
Glsi05g0303 271 SUPERFAMILY NagB/RpiA/CoA transferase-like 38 186 IPR037171 -
Glsi05g0303 271 FunFam Ribose-5-phosphate isomerase A 42 175 - -
Glsi05g0303 271 NCBIfam ribose 5-phosphate isomerase A 42 265 IPR004788 GO:0004751|GO:0009052
Glsi05g0303 271 CDD RPI_A 42 262 IPR004788 GO:0004751|GO:0009052
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0303 Glsi-ChrGlsi05 50334666 50335481 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0303 05 50334666 50335481 Glsi05g0303 05 50334666 50335481 ECH