Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0289 ATGGGCGTACTTGATTTTTTTTCAGATTACTTCACAGTTTACACCAGAAAAAAGAAACGCAAACCAATGCAGACTGTTGAAATCAAGGTGAAAATGGATTGTGATGGCTGTGAAAGAAGAGTTAGAAACTCTGTTTCCCGCATGAAAGGTGTGAAACAAGTGGAGGTGAACAGAAAGCAGAGCAAGGTAGCCGTGACTGGCTATGTTGATGCAAACAAGGTCTTAAAGAAGGTGCAGAGCACTGGGAAGCGAGCAGAGTTTTGGCCCTATATTCCCTATAACTTAGTGGCTTATCCTTATGTGGCTCAGGCTTATGACAAGAAGGCACCTGCTGGTTTTGTCAAAAACGCAGTCCAAGCACTCCCTGCCCCAAATGCGCCAGATGAGAAATTCACCTCTCTCTTCAGTGATGAAAACCCCAATGCATGTTCCATCATGTGA 441 0.4422 MGVLDFFSDYFTVYTRKKKRKPMQTVEIKVKMDCDGCERRVRNSVSRMKGVKQVEVNRKQSKVAVTGYVDANKVLKKVQSTGKRAEFWPYIPYNLVAYPYVAQAYDKKAPAGFVKNAVQALPAPNAPDEKFTSLFSDENPNACSIM 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0289 146 ProSiteProfiles Heavy-metal-associated domain profile. 23 86 IPR006121 GO:0046872
Glsi05g0289 146 Pfam Heavy-metal-associated domain 29 83 IPR006121 GO:0046872
Glsi05g0289 146 Gene3D - 10 88 - -
Glsi05g0289 146 SUPERFAMILY HMA, heavy metal-associated domain 22 89 IPR036163 GO:0046872
Glsi05g0289 146 FunFam Heavy metal-associated isoprenylated plant protein 26 13 88 - -
Glsi05g0289 146 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 25 144 IPR045181 GO:0046872
Glsi05g0289 146 CDD HMA 27 86 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0289 Glsi-ChrGlsi05 49971406 49973055 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0289 05 49971406 49973055 Glsi05g0289 05 49971406 49973055 ECH