Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0288 ATGTACAGAGGAAAGATGGTCGCTAGCACAACTTGTGTTCTCAAAGTGAACATTCACTGTGATGGGTGTAAGCAGAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGTGTTTACCAAGTTCAAATAGATGCAGAACAGCAGAAAGTAACAGTTTCAGGAAGTGTGGATTCTTCAAATTTGATCAAGAAACTGGTAAGAGCTGGGAAGTATGCTGAGCTTTGGTCACAGAAAACAAATCAGAATCAGAAGCAGAAGACCAACGTCTGTGTGAAAGATGACAAGAACAAAGGGCAAAAGCGAGGACTGGTTAAGGGGTTTGAGCAAGCCTTTAAAAACCAGCAGAAATTTCCTGCTTTTAGTTTTGAAGAGGATGATGACTACTATGATGAGGATGAGGATGAAGACGATGAAGATGATGAGCTACGGTTTATCAGGGAGAAAGCTAATCAACTGAATTTCCTCAGGCGGCAACAATCTGATGCAAATAATGCAAAGAAAGGTGCTGCTGGAGGTATTTCGACTGTTTCAAAGGGGAACAATAATGCTGGTAATGCTAATGGTGGCAAGAAAGGAGGCCCTAATCAGAATATGGGAATGAACGGTAGCCCTGCTGCTGCAGTAATTGATCCCAAAACCATGGCAGCCGCTCTGAATATCAACAACACCCACTTGGGTGGTGAAAGTCTCAATCATGGAGAACCCAGAAAGGTAAATGACATAGGCACTATGATGAGTCTAGCTGGTTTTAATGGAAATGGTGCCAGTTCTGCAACTGTTTTAGGGAACAATTCCAAGAGCTTGGGAGGTTTTCAAGTTCAGCCCAACAATGGAATTCCAGCAACTCCTTCAGGACTTCCAAACGGTGGTTTTGGAGGTCAATACCCATCATCTCTTCTAATGAACATGAATGGTTTCAACAATCATCCATCTCCATCCTTGATGAACATGAACTTGCAGAACAGGCAAGCCATGCAGCAACAACAACCCCAGATGATGTATCACAGGGCCCCATTTGTTCCTCCTAGCACTGGCTATTGCTACAACAACTACAACTACGGCCCTGCCATTGCCAATTACTCCTATCCTCTGCCTAATTACTCTGGAAGTGATTACCATGATCACCATTATGCAGCAAATATGTTCAGTGATGAAAACACTGACAGCAGCTGTTCAGTAATGTAA 1182 0.4298 MYRGKMVASTTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDSSNLIKKLVRAGKYAELWSQKTNQNQKQKTNVCVKDDKNKGQKRGLVKGFEQAFKNQQKFPAFSFEEDDDYYDEDEDEDDEDDELRFIREKANQLNFLRRQQSDANNAKKGAAGGISTVSKGNNNAGNANGGKKGGPNQNMGMNGSPAAAVIDPKTMAAALNINNTHLGGESLNHGEPRKVNDIGTMMSLAGFNGNGASSATVLGNNSKSLGGFQVQPNNGIPATPSGLPNGGFGGQYPSSLLMNMNGFNNHPSPSLMNMNLQNRQAMQQQQPQMMYHRAPFVPPSTGYCYNNYNYGPAIANYSYPLPNYSGSDYHDHHYAANMFSDENTDSSCSVM 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0288 393 FunFam Copper transport protein ATOX1 8 77 - -
Glsi05g0288 393 SUPERFAMILY HMA, heavy metal-associated domain 9 75 IPR036163 GO:0046872
Glsi05g0288 393 MobiDBLite consensus disorder prediction 173 201 - -
Glsi05g0288 393 Gene3D - 7 81 - -
Glsi05g0288 393 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 10 393 - -
Glsi05g0288 393 ProSiteProfiles Heavy-metal-associated domain profile. 9 72 IPR006121 GO:0046872
Glsi05g0288 393 Pfam Heavy-metal-associated domain 14 68 IPR006121 GO:0046872
Glsi05g0288 393 Coils Coil 144 164 - -
Glsi05g0288 393 MobiDBLite consensus disorder prediction 154 204 - -
Glsi05g0288 393 CDD HMA 13 72 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0288 Glsi-ChrGlsi05 49886390 49888763 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0288 05 49886390 49888763 Glsi05g0288 05 49886390 49888763 ECH