Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0266 ATGATCACTTGGAAAGATTTATACACCGTTTTGACGGCAGTGGTTCCTCTGTACGTGGCCATGATCTTAGCCTACGGTTCCGTCAGGTGGTGGAAGATATTCTCACCGGACCAGTGCTCTGGCATCAACCGGTTCGTCGCCATCTTCGCCGTCCCTTTACTCTCTTTCCATTTCATCTCCAGCAACAATCCTTACGAGATGAACTTGCGCTTCATCGCCGCCGATACCCTTCAGAAGATCATCATGCTGGTCGCGCTCGGAATCTGGACCAACTTCACCAAGAACGGTAGCCTCGAGTGGATGATCACCATTTTCTCGCTCTCCACATTGCCCAACACTCTCGTCATGGGGATTCCACTGTTGATTGCTATGTACGGCGAATACTCCGGCAACCTCATGGTTCAGGTGGTGGTGTTGCAGTGTATCATCTGGTACACCCTCTTGCTCTTCCTCTTCGAATATCGTGGAGCCAAGTTGCTGATCATGGAGCAGTTCCCGGAGACCGCGGCGTCCATCGTGTCGTTCAAGGTTGATTCCGACGTGGTTTCACTGGATGGCCGTGACTTTCTCGAGACCGACGCCGAGGTCGGAGACGACGGGAAACTTCATGTGACGGTGAGGAAGTCCAACGCGTCGAGGAGGTCATTTATGATGAGTACTCCCCGTCCATCGAATCTGACCGGTGCCGAAATTTACAGCCTGAGTTCTTCCCGGAATCCTACACCGCGAGGTTCCAATTTCAACCACGCAGATTTCTACTCAATGATGGGATACCCGGCGAGGCATTCTAACTTCACCGGCACGGCGGAGTTATACTCCGTACAGCCTTCGAGACCATCGAATTTTGAAGAGAACGGTGCAGCACCAATGGCGGCTCAGGCTATGAGTTCTCCCCGATTTGGATTCTACCCGGCACAGGCATCATCATATCCAGCTCCAAATCCAGAATTCTCATCCACCTTGAGCTCCAAAAGCGTTAAAAACCAGCAACAGCAGCAGCAAAGCTACCAGCAAAATCTACCACAAGCTACTAACAGTAAAGCTAGCCATGATGCTAAAGAGCTCCACATGTTTGTGTGGAGTTCAAGCGCATCACCCGTCTCAGAAGGTGGCGCTGGGGGCGGCGGTGGAGGGCTGCATGTATATGGAGGCAGCACTGACGAACAATCTGGACGGTCTGATCAGGGAGCCAAAGAGATTCGGATGCTGGTAGCCGATGATCACCCTCAAAATGGGGAATCCTACAAAGCTATTTCAGAGCCGGAATTTTTAGGTGAAGAGTTCAAGTTAGCGGGGAAGGGAGGAGAACCACAAACAGCAGCAGCACAGGAAGAAGAGAGAGAGAAAGAGGGACCCACTGGGCTGAACAAGTTGGGTTCGAGTTCAACGGCGGAGCTACACCCGAAAGCCGGTGGAGGAACGGAGTCCGGCATCGGCAAACAAATGCCTCCGGCGAGTGTCATAACCCGTCTGATTCTGATAATGGTGTGGCGGAAGCTTATCCGCAACCCCAACACATACTCAAGCCTCATTGGCGTCATATGGTCCCTCGTTGCCTGTCGGTGGAATGTGCAAATGCCAAGTATAGTAAAGAAGTCAATCTCCATACTGTCTGATGCTGGGCTAGGAATGGCTATGTTCAGTTTAGGTCTGTTTATGGCTCTTCAACCCAAGATCATTGCATGTGGCAACTCCGCTGCTTCATTTGCTATGGCCATTCGATTCCTCACCGGTCCGGCAGTGATGGCAGCAGCCTCCATTGCGATCGGCCTCCGCGGTACCCTCCTGCGTGTCGCTATAGTTCAGGCTGCACTTCCACAAGGGATTGTTCCATTTGTGTTTGCCAAAGAGTACAATGTCCATCCAGCTATTCTTAGCACAGCGGTTATATTTGGGATGTTAATTGCATTGCCAATAACTCTAGTCTACTACATACTTCTTGGTTTGTAG 1950 0.5133 MITWKDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISSNNPYEMNLRFIAADTLQKIIMLVALGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGEYSGNLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVVSLDGRDFLETDAEVGDDGKLHVTVRKSNASRRSFMMSTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHADFYSMMGYPARHSNFTGTAELYSVQPSRPSNFEENGAAPMAAQAMSSPRFGFYPAQASSYPAPNPEFSSTLSSKSVKNQQQQQQSYQQNLPQATNSKASHDAKELHMFVWSSSASPVSEGGAGGGGGGLHVYGGSTDEQSGRSDQGAKEIRMLVADDHPQNGESYKAISEPEFLGEEFKLAGKGGEPQTAAAQEEEREKEGPTGLNKLGSSSTAELHPKAGGGTESGIGKQMPPASVITRLILIMVWRKLIRNPNTYSSLIGVIWSLVACRWNVQMPSIVKKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSAASFAMAIRFLTGPAVMAAASIAIGLRGTLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYILLGL 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0266 649 MobiDBLite consensus disorder prediction 433 481 - -
Glsi05g0266 649 Pfam Membrane transport protein 9 644 IPR004776 GO:0016020|GO:0055085
Glsi05g0266 649 MobiDBLite consensus disorder prediction 311 348 - -
Glsi05g0266 649 NCBIfam auxin efflux carrier 1 649 IPR014024 -
Glsi05g0266 649 MobiDBLite consensus disorder prediction 311 350 - -
Glsi05g0266 649 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 649 - -
Glsi05g0266 649 MobiDBLite consensus disorder prediction 364 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0266 Glsi-ChrGlsi05 49032280 49036626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0266 1 649 Organic Solute Cotransporters AT1G70940 75.299 0.0 928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0266 05 49032280 49036626 Glsi05g0266 05 49032280 49036626 ECH