Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0247 ATGGGGAAAAGGGTGGCTGTAGATCCTCCGAACTTCAAGAAATACGGTGTTCCTTTCTACTCGGTTGCATGGATTCCACAAAACGTTATGAAATCGCTGCAGAATCAAACCACCGACAAAGTCTCCGACGCAGCCGACAACTCTGCGCCAATGCCACCGAGCCGGACTGGGGAGCACTACCTGGCGCTCGCCGGCGGTGGTGGAGAAGGCCGCAGCGGTATTCCCAATGCTGTGTTGCTTGCTCACTTCGATATCGCATCTAATTCTCTCTCTGATCAGCCGGTGGGTAAGCTAGGAACTGATTCCGAGTTGCCTTATAGAATGGCACTTCACCCCAGTGGAGATGGCCTTATTTGTGCAATGCCAAAGAATTGCAGATGGTTTGAATGGGATGAAAACAAGAGTGCAGAAATTCATAAGTTGGGTTTGAAGTTGTCTGAGAAAGTGCTCACTCAGTTAGAGGATGTTGGACAGCAGTTAGCATTGGCGTTTAGCAATGATGGTACTTTACTAGCTGTTGGTGGGGAGGATGGTAATCTAAGGGTTTTCAAGTGGCCTAGCATGGAAATTATTCTCAATGAGTCTAAAGCTTATTCCACAGTCAAAGACTTACATTTCAGTTCTGATGGCAAAGTGCTTGTCTCTTTAGGAAGCGGTGGCCCCTGCAGAGTTTGGGATGTTTCTTCATCGACAGTTTTAACTTCTTTATCAAACCAAAATCGTGAGGTTTATAGCTCCTGCAGATTTTCTCAAATCCGTGATAGGACCCATGTCTTGTATATTGCAGGCATGACAAAAAAAGGTGGAAGCATTCTGACATGGGATACAAAGACAGGGGAAAGGATGGGCTCAAAGCATATTATTCGTGATGCAATCTCTGCATTGAATGCCTCAGCTGATGGAAAGTTACTTGCATGTGGAACACCTTCGGGAGACATTGTGATTGTAAATACGACCAATATGCAGATTCATACAATGATAAAAAAGGCTCACCTTGGCATTGTAACTGCATTAGCCTTCTCCCCTGATTCAAGGGCCTTGGCTTCTGTATCCTTGGATTCAAGTGCAAGGGTTACTATAATTGAGGAGAGGAGAAATGGAGGATGGAGCTTGTGGATTGCAGTATTCATCATCTTACTTGCAATAGCTGCTGCCTACTTCCTGAAATTTCAAGAAATCGACAAGTGA 1188 0.452 MGKRVAVDPPNFKKYGVPFYSVAWIPQNVMKSLQNQTTDKVSDAADNSAPMPPSRTGEHYLALAGGGGEGRSGIPNAVLLAHFDIASNSLSDQPVGKLGTDSELPYRMALHPSGDGLICAMPKNCRWFEWDENKSAEIHKLGLKLSEKVLTQLEDVGQQLALAFSNDGTLLAVGGEDGNLRVFKWPSMEIILNESKAYSTVKDLHFSSDGKVLVSLGSGGPCRVWDVSSSTVLTSLSNQNREVYSSCRFSQIRDRTHVLYIAGMTKKGGSILTWDTKTGERMGSKHIIRDAISALNASADGKLLACGTPSGDIVIVNTTNMQIHTMIKKAHLGIVTALAFSPDSRALASVSLDSSARVTIIEERRNGGWSLWIAVFIILLAIAAAYFLKFQEIDK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0247 395 Pfam WD domain, G-beta repeat 161 183 IPR001680 GO:0005515
Glsi05g0247 395 Pfam WD domain, G-beta repeat 329 358 IPR001680 GO:0005515
Glsi05g0247 395 MobiDBLite consensus disorder prediction 35 55 - -
Glsi05g0247 395 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 59 357 IPR011047 -
Glsi05g0247 395 FunFam SEC12-like protein 2 53 365 - -
Glsi05g0247 395 PANTHER PROLACTIN REGULATORY ELEMENT BINDING PROTEIN 12 390 IPR045260 GO:0005085
Glsi05g0247 395 SMART WD40_4 146 184 IPR001680 GO:0005515
Glsi05g0247 395 SMART WD40_4 319 360 IPR001680 GO:0005515
Glsi05g0247 395 SMART WD40_4 191 226 IPR001680 GO:0005515
Glsi05g0247 395 SMART WD40_4 278 317 IPR001680 GO:0005515
Glsi05g0247 395 Gene3D - 48 366 IPR015943 GO:0005515
Glsi05g0247 395 ProSiteProfiles Trp-Asp (WD) repeats profile. 201 235 IPR001680 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0247 05 48138781 48159748 Glsi05g0247 05 48138781 48159748 ECH