Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1935 ATGGACGACTCTTTCATGGTGAACAAGGGGCATCAAAGGAATTTAAGATTCCTAAATACTCTTGAAAGCTCTAAACAAAATAATTCCAGGGTCTATAGTGGAAGCTATGATGGTTATGTGATTGATGGTGAAGAGGATGCAAGAGATATCTCAGGAATAGAAGAACCAACTACTAAGGTTCTCATTCCAGGTCTTCCAGATGAGTCAAATGGTGAATCTGGTGCTTCAATAAATAGTTGCTTTTGGCAATGGAAGCCTAAACTTAACGTGCACTATGAAAAGGCTGGGTGTGAAAATGTCGATTCTCCACATGTTCTCTTCCTTCCTGGTTTTGGTGTTGGTGCTTTCCATTATGAGAAGCAACTGAAGGATTTGGGTGGTGACTTTAGAGTATGGGCACTGGATTTTCTCGGTCAAGGAATGTCGCTGCCTTTTGAAGACCCTACACCTCAATCTAAGGAAGGGGATACATCAGATGGTAAAACTTCTTCGTGGGGTTTCGGAGATGAAACTGAACCATGGGCAACAAAGCTTGTATACTCTATTGATTTATGGCGGGATCAAGTTCGCTACTTCATAGAAGAGGTAATTGGCGAACCGGTCTACATTGTCGGCAACTCACTAGGAGGATTTGTCGCATTATATTTTGCAGCATGTTTCCCTCATTTAGTGAAGGGCGTCACATTGCTTAATGCAACACCTTTTTGGGGATTTCTACCCAATCCTGTAAGATATCCGGGACTAGCAAAAATATTTCCATGGGCTGGAACTTTTCCTCTACCATCAAATATAAAGAGGCTAACAGAGTTGGTGTGGGAGAAAATTAGTGACCCAACAAGCATTGCTGAGGTACTTAACCAAGTTTATGCAGATCATTCAACCAAGGTAGATAATGTGTTTTCACGCATAATTGAAACGACAAGGCATCCGGCTGCTGCTGCATCATTTGCCTCAATTATGTTTGCTCCTCAGGGAGAATTATCCTTCAACGAGGCATTATCTAGATGTCGAACCAACAATGTGCCGATCTGCCTCATGTATGGTAAAGAAGATCCTTGGGTGAAGCCAATTTGGGGACTTCAGGTTAAAAGGCGGGTGCCTGAAGCTCCATATTATCAAATCACCCCTGCTGGTCACTGCCCTCATGATGAAGTTCCTGAGGTCATAAATTTCTTACTACGTGGGTGGATCAAAAGCCTTGAGTCTCATGGTTCTGTCTCATTACCTCTGCTTGATGACTCAGACAGTATAAAATTCACAATAGCCAGGGAGTTAGAATTTGTCAGAGAAGGTTCCAGGAAATCAGTGATGGTTAGATACTTCGGTTCTAGTGTCACACTTTGGGACAGGATAAGATCCTACATCAATTCTCGCTTCAAGTTCAGGAATTTGGCTCTCAAGTCTCGGTGA 1410 0.4262 MDDSFMVNKGHQRNLRFLNTLESSKQNNSRVYSGSYDGYVIDGEEDARDISGIEEPTTKVLIPGLPDESNGESGASINSCFWQWKPKLNVHYEKAGCENVDSPHVLFLPGFGVGAFHYEKQLKDLGGDFRVWALDFLGQGMSLPFEDPTPQSKEGDTSDGKTSSWGFGDETEPWATKLVYSIDLWRDQVRYFIEEVIGEPVYIVGNSLGGFVALYFAACFPHLVKGVTLLNATPFWGFLPNPVRYPGLAKIFPWAGTFPLPSNIKRLTELVWEKISDPTSIAEVLNQVYADHSTKVDNVFSRIIETTRHPAAAASFASIMFAPQGELSFNEALSRCRTNNVPICLMYGKEDPWVKPIWGLQVKRRVPEAPYYQITPAGHCPHDEVPEVINFLLRGWIKSLESHGSVSLPLLDDSDSIKFTIARELEFVREGSRKSVMVRYFGSSVTLWDRIRSYINSRFKFRNLALKSR 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1935 469 PANTHER PHEOPHYTINASE, CHLOROPLASTIC 19 460 IPR044211 GO:0015996|GO:0080124
Glsi04g1935 469 Gene3D alpha/beta hydrolase 69 400 IPR029058 -
Glsi04g1935 469 Pfam Alpha/beta hydrolase family 105 388 IPR000073 -
Glsi04g1935 469 SUPERFAMILY alpha/beta-Hydrolases 78 399 IPR029058 -
Glsi04g1935 469 MobiDBLite consensus disorder prediction 145 166 - -
Glsi04g1935 469 FunFam Pheophytinase, chloroplastic 73 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1935 Glsi-ChrGlsi04 69022262 69026168 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g1935 04 69022262 69026168 Glsi04g1935 04 69022262 69026168 ECH