Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1925 ATGATTCAGCTTCTTCTGCCTTCAACTACCCGCATGTCCTTCAACAGGAAAATGAAATGCCCACCACTTAGCCTCGTTAGGGAACACAACATTCTGTTCCTTCGAGGCTTCATGATCTTGTTCCTCAGTTGCATAACCATTCGACTTAATCTCTGTATTTCCTGTATCCCTTCTTCATTAAAAGCACTTCCCCTCGAAGGACATTTCAATTTTGATGAAGTTAGCCATGCAGCCAGAGACTTTGGCAACAGATACCGATATTATCCCGTGGCTGTACTGCATCCAAAATCAGTTTCAGATATTGCAGTCATCATCAAGCATATCTGGCAGATGGGTCCTCGCTCACAGCTTACTGTTGCAGCCAGAGGCCATGGCCACTCACTCCAAGGCCAGGCACAAGCTCATGGAGGAGTTGTGATCAACATGGAATCACTCAAAGTTCCTGAAATGAAGGTACATACAGGAAATTTTCCATATGTGGATGTCTCAGGTGGCGAGCTGTGGATAAACATCCTGCATGAGAGTCTAAGATATGGGTTAGCACCAAGATCATGGACAGACTACCTACATCTGACAGTTGGTGGCACTCTGTCCAACGCCGGAATCAGTGGGCAGGCATTCCGTCATGGTCCCCAAATAAGTAATGTTCAGCAGCTGCAGATTGTAACAGGAAAGGGGGAGGTGGTAAACTGTTCTGAGGAGCAGAATGGCGAACTCTTTCACGGTGTACTTGGGGGGCTTGGTCAGTTTGGCATTATAACCCGGGCAAGAATTTCCCTTGAACCAGCCCCTGCCATGGTAAAATGGATTAGATTGCTATATGATGATTTCACAGCATTCACTAGAGACCAAGAAAAATTAATATTTGCAGAGAGCACATTTGATTACGTTGAAGGATTTGTGATAATAAACAGAACTGGTCTGCTAAATAACTGGAGATCATCCTTCAACCCACAAGACCCAGTTCAAGCTAGTCAGTTCAAGTCAGATGGGAGAACTCTCTTCTGCCTAGAATTGGCCAAATACTTCAACCTGGAAGATTCCAATGCAGTAAATGAGGAAGTCCAAAAACATTTGTCCCACTTGAACTATATCTCATCAACACTTTTTCTTACAGAAGTCACATATGTAGATTTCTTAGACAGGGTTCATGTCTCTGAGCTCAAATTGCGGTCAAAAGGCTTGTGGGACGTTCCACACCCATGGCTCAATCTTTTAATACCCAGAAGCAAAATACACAATTTTGCAGAGGTCGTCTTTGGGAATATCCTAACAGAAACAAGCAATGGCCCTGTTCTTATCTACCCCGTAAATAAATCAAAGTGGGACAACAGAACTTCTGTTGTTATTCCAGAAGAAGATATTTTCTACTTAGTGGCATTTCTGACCTCTGCAGTTCCTTCTTCCAATGGACCAGATGGCCTAGAACACATTTTAACTCTAAATAAAAGAATTTTACAATATTGTGAAAGAGCCCATCTTGGGGTAAAGCAATATTTACCCCACTACACTACACAGGAAGAATGGCGGGGCCACTTTGGTCCTCAGTGGGAGGCTTTTCTGCACAGAAAATCTGTTTATGACCCATTGGCAATACTCGCTCCTGGCCAACGCATATTTCAAAAAGCAATAACCTTCTCATGA 1644 0.4343 MIQLLLPSTTRMSFNRKMKCPPLSLVREHNILFLRGFMILFLSCITIRLNLCISCIPSSLKALPLEGHFNFDEVSHAARDFGNRYRYYPVAVLHPKSVSDIAVIIKHIWQMGPRSQLTVAARGHGHSLQGQAQAHGGVVINMESLKVPEMKVHTGNFPYVDVSGGELWINILHESLRYGLAPRSWTDYLHLTVGGTLSNAGISGQAFRHGPQISNVQQLQIVTGKGEVVNCSEEQNGELFHGVLGGLGQFGIITRARISLEPAPAMVKWIRLLYDDFTAFTRDQEKLIFAESTFDYVEGFVIINRTGLLNNWRSSFNPQDPVQASQFKSDGRTLFCLELAKYFNLEDSNAVNEEVQKHLSHLNYISSTLFLTEVTYVDFLDRVHVSELKLRSKGLWDVPHPWLNLLIPRSKIHNFAEVVFGNILTETSNGPVLIYPVNKSKWDNRTSVVIPEEDIFYLVAFLTSAVPSSNGPDGLEHILTLNKRILQYCERAHLGVKQYLPHYTTQEEWRGHFGPQWEAFLHRKSVYDPLAILAPGQRIFQKAITFS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1925 547 SUPERFAMILY FAD-binding/transporter-associated domain-like 69 262 IPR036318 GO:0050660
Glsi04g1925 547 FunFam Cytokinin dehydrogenase 1 141 265 - -
Glsi04g1925 547 PANTHER GULONOLACTONE OXIDASE 37 541 - -
Glsi04g1925 547 FunFam Cytokinin dehydrogenase 2 266 499 - -
Glsi04g1925 547 SUPERFAMILY FAD-linked oxidases, C-terminal domain 264 540 IPR016164 GO:0003824|GO:0050660
Glsi04g1925 547 Gene3D - 142 265 IPR016169 -
Glsi04g1925 547 Gene3D - 266 499 IPR016170 -
Glsi04g1925 547 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 89 124 IPR006093 GO:0016491
Glsi04g1925 547 Gene3D - 73 540 IPR016167 -
Glsi04g1925 547 ProSiteProfiles PCMH-type FAD-binding domain profile. 85 263 IPR016166 GO:0071949
Glsi04g1925 547 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 264 540 IPR015345 GO:0009690|GO:0019139|GO:0050660
Glsi04g1925 547 Pfam FAD binding domain 90 232 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1925 Glsi-ChrGlsi04 68891410 68893650 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g1925 04 68891410 68893650 Glsi04g1925 04 68891410 68893650 ECH