Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1695 ATGGCTACGAGACCAAGAACATCAACTTTCCCGGGACAACCTTCCCTTCGTCCTGTGTATGAAGACTTTCAACCTAAAATAGAAATAAAGGAAAATCAGGAAGCTCACGTTTTTCATATTCATCTTCCAGGCTTTACAAGGGAGCAAATAAGGATTACATATAAGAACTTTATCCGAATGGTGAACATTTCCGGAGAACGACAAATTGACAGATATAGATGGAACCGTTTCAATCAATCGTATCCAGTTCCCCTAATCTGCGAAGCAGAGAAACTTCAGGCCACGTTTGATCAGGGAACTCTTACCATTATAATGCCAAAGAAGCTTGTTTCACCAGTTGCTCCTAAAATGGAAGAGAAAACACAAGAGAAAGATGCATTTCCTTTAAAGAAACCTGTAGCTGAAGAACCGAAGGGATTGAAAGCTCTGATAACTCCAGAGCCCATAAGGGAGTCTAAGCCTCAAAAGGGACAAGAGGAAATTGAGCCAAAACCCAAATTAATAACTCCAAGAAAGCGAACAGATGAAAAGCCTCCAAGGGGTCCATCTGAAATTGAGGAAAAACCCATATTCAAAAAGGCTCCAATAAAGGCAACAGATGAACAGCTTGAAGAGGGTCATGAGGAAATTAAGCAAAAGACCAAATTATCAGCAATTCCCAGAAAGCGAACAGATGAAAAGGCTGTGGTAACCAGGGCTGAAGATGCTGAGAGAAAAAAGGAGATAAAGAAGGAAGTTAAAGAAGCAGCTGATGCCAAACCTTCTGAATCAAGAAAGATTCAGAAAAATGAGAAGGGCATGTTTAAGGAAAAAGAAATTAGGACAAGAAAAGTGACTCCAAAAACTCCACAAACCACCAGCAAAGCTGCTCCAGCTATTGCGGATGAAGGGGAGGGAAAAGAGGACATGATCGACTCAATTGGCAAGGGAATTAAACAAGTGTCTACTTCTACTTCCCAGATTGTCAAAAGAATTGCAGAAGTTAAATGGAATGATGAAGACCAGCGTGCACTAGTAAATATGGGTGCTGCATTACTAGTAATGGCAGCACTGGGAGCTTATGTATCCTATAGGTTTGCCTCTTCTGGGAGAAGCTAA 1098 0.4107 MATRPRTSTFPGQPSLRPVYEDFQPKIEIKENQEAHVFHIHLPGFTREQIRITYKNFIRMVNISGERQIDRYRWNRFNQSYPVPLICEAEKLQATFDQGTLTIIMPKKLVSPVAPKMEEKTQEKDAFPLKKPVAEEPKGLKALITPEPIRESKPQKGQEEIEPKPKLITPRKRTDEKPPRGPSEIEEKPIFKKAPIKATDEQLEEGHEEIKQKTKLSAIPRKRTDEKAVVTRAEDAERKKEIKKEVKEAADAKPSESRKIQKNEKGMFKEKEIRTRKVTPKTPQTTSKAAPAIADEGEGKEDMIDSIGKGIKQVSTSTSQIVKRIAEVKWNDEDQRALVNMGAALLVMAALGAYVSYRFASSGRS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1695 365 MobiDBLite consensus disorder prediction 152 278 - -
Glsi04g1695 365 Gene3D - 9 110 IPR008978 -
Glsi04g1695 365 Coils Coil 232 253 - -
Glsi04g1695 365 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 18 122 IPR002068 -
Glsi04g1695 365 MobiDBLite consensus disorder prediction 137 300 - -
Glsi04g1695 365 CDD ACD_sHsps-like 28 107 - -
Glsi04g1695 365 Pfam Hsp20/alpha crystallin family 28 110 IPR002068 -
Glsi04g1695 365 SUPERFAMILY HSP20-like chaperones 18 108 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1695 Glsi-ChrGlsi04 60139769 60142557 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0215 14 2775416 2777694 Glsi04g1695 04 60139769 60142557 CCT