Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1650 ATGCTGCGCACCATACCACAATCCACTACAAAGATTCTCTGTCCAGCATCACCAATTTTGTCTTCTTACTCCATTTTTCTTTCCTTTAAACACCGTCCCTTTCACGCCATCGTCTTGACTGGTTTTTTTTTTACTCAACCAGTTACACCCGATTCGACTCAGCAAAATATGAGACGCTTCAGGCGATTCGAGCTCATCGAAGAACCCTTTTGCTACACCCCACCATTCTTCTTCAGAGAAACCTCCATTTTTGCTCCCAAAACCATCACTTTCCCTTTATTCGTCGAAGAAGATCTCGATGTTGGTTACGCTCTTGATCTCTTTGACTCTTGCCCGCTTCCGAGCTCATTTGAAGCCTTCGACACCGTAACAAATCTGGTGCGCATCGATCGCACGCCGTCGCTTACTTACAGGCGAGTTCATCGAGTCGAGAGGCTGCTCGAGACTGAGTTCTACTTGCGAAGCCTATGCGACAGAGTCTCCGGGTTGGAGTCACGTTTCGAGCGGCTTGTTAAGTCGAAGGTAAATGCCGGTGATAGGAAGTACACGTTGACGGCGGAGATCAAGGGGCCGGAGAAGGACGGTTTTGAGAGGAGGTACAAATGGGTTGCAGAAATTGTAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGAGGAGGAGAAGAAGGGTCGGATTGCAAAGAACTTCAAATGGACGGCGGCGATTAAGGGGAATGGAGAGGATAGTGGAAGTTCAAGGAAGTACACATTACAGGTTGAGACCGGTGATGCTGGGAAGAAGGAGAAGGAAAATGAGGAGAAGAAGGGTAAGAAAGATAAGAAGAGAAGTGAATCGCGCATTGTGGAGATTGAAGAGCCCAGTGAGCAAGGAGGTGTCGTTTTAAGACAGGCATTTGCAAAGAGGTTTGGAGCTGTTCAAAATAACAAGGGCAAAAGGAAGGATTTATCTCCCCAAGATGCTGCAATGTTGATCCAAATCAGCTTTAGAGCTTATTTGATCCGTAGGTCAAAGGCTCTTCGTGCCCTTAGAGAACTTGCTGTTGCAAAATCTAAGTTAAAGAAAATCAGAGCTCAGTTCAATAATTTCACGTATCGTAGTCGTGTAGCTCATGATGCAGAGGAGCGCCAGAGGTTTTCTGAGAAAATCATTGTCCTGCTTCTCACTGTTGATGCCATTGAGGGAGCTGATTTAATGGTGCGATCTTCAAAGAGGTCAATGATTGATGAACTGGAAGCAATGCTTGATGTTGTAGACCCTCAGCCTACTGGACGATCACTCTCTATTAAAAGAAGGGCCTTTGATATGCCTGATGGAGTTATCCGAAAGGAAATTGAAGAAGGGGTTGCACAGGTTGTGCAAATGCTTGACGAGGCAGAGAATAGCAGCAGCACCTTTGAAGCTTGCCTGTGA 1419 0.4595 MLRTIPQSTTKILCPASPILSSYSIFLSFKHRPFHAIVLTGFFFTQPVTPDSTQQNMRRFRRFELIEEPFCYTPPFFFRETSIFAPKTITFPLFVEEDLDVGYALDLFDSCPLPSSFEAFDTVTNLVRIDRTPSLTYRRVHRVERLLETEFYLRSLCDRVSGLESRFERLVKSKVNAGDRKYTLTAEIKGPEKDGFERRYKWVAEIVEEEKKKKKKKKKEEEEKKGRIAKNFKWTAAIKGNGEDSGSSRKYTLQVETGDAGKKEKENEEKKGKKDKKRSESRIVEIEEPSEQGGVVLRQAFAKRFGAVQNNKGKRKDLSPQDAAMLIQISFRAYLIRRSKALRALRELAVAKSKLKKIRAQFNNFTYRSRVAHDAEERQRFSEKIIVLLLTVDAIEGADLMVRSSKRSMIDELEAMLDVVDPQPTGRSLSIKRRAFDMPDGVIRKEIEEGVAQVVQMLDEAENSSSTFEACL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1650 472 ProSiteProfiles IQ motif profile. 321 349 IPR000048 GO:0005515
Glsi04g1650 472 Coils Coil 341 361 - -
Glsi04g1650 472 Coils Coil 203 231 - -
Glsi04g1650 472 MobiDBLite consensus disorder prediction 239 283 - -
Glsi04g1650 472 Coils Coil 444 464 - -
Glsi04g1650 472 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 243 424 IPR040400 -
Glsi04g1650 472 MobiDBLite consensus disorder prediction 256 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1650 Glsi-ChrGlsi04 52750273 52759921 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g1650 04 52750273 52759921 Glsi04g1650 04 52750273 52759921 ECH