Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1513 ATGGGTCAAGCTTTCCGGAAGCTCTTCGATACCTTCTTCGGCAACTCTGAGATGCGGGTTGTGATGCTTGGTCTTGATGCTGCGGGTAAAACAACTATACTATACAAGCTGCATATTGGAGAAGTTTTATCAACTGTCCCTACTATTGGTTTCAATGTGGAGAAAGTTCAGTATAAGAATGTTATGTTCACAGTTTGGGATGTTGGAGGGCAAGAAAAATTAAGGCCACTGTGGAGGCACTATTTTAATAACACAGATGGTTTGATATATGTTGTTGATAGCTTGGACCGAGAGAGAATTGGGAAAGCAAAGCAGGAATTTCAGGCTATCATAAGTGACCCATTTATGCTCAATAGTGTCATCTTGGTTTTTGCCAACAAACAGGACATGAAAGGAGCAATGTCACCAATGGAAGTTTGTGAAGGACTAGGTCTCTTTGAACTCAAGAATAGAAAATGGCACATACAAGGTACATGTGCACTAAGGGGAGATGGCCTTTATGAGGGCTTGGACTGGTTGGCTGCAACTCTGAAGGAGAGAAAAGCTGCTGGATACTCTTCACTAGGAACCTCATCTTTCTAA 582 0.421 MGQAFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIISDPFMLNSVILVFANKQDMKGAMSPMEVCEGLGLFELKNRKWHIQGTCALRGDGLYEGLDWLAATLKERKAAGYSSLGTSSF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1513 193 SMART arf_sub_2 1 181 - -
Glsi04g1513 193 CDD Arf1_5_like 18 176 IPR045872 GO:0003924
Glsi04g1513 193 Gene3D - 3 186 IPR027417 -
Glsi04g1513 193 NCBIfam small GTP-binding protein domain 16 137 IPR005225 GO:0005525
Glsi04g1513 193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 181 IPR027417 -
Glsi04g1513 193 FunFam ADP-ribosylation factor 2 4 186 - -
Glsi04g1513 193 PRINTS GTP-binding SAR1 protein signature 119 140 IPR006689 GO:0003924|GO:0005525
Glsi04g1513 193 PRINTS GTP-binding SAR1 protein signature 74 99 IPR006689 GO:0003924|GO:0005525
Glsi04g1513 193 PRINTS GTP-binding SAR1 protein signature 19 42 IPR006689 GO:0003924|GO:0005525
Glsi04g1513 193 PRINTS GTP-binding SAR1 protein signature 47 71 IPR006689 GO:0003924|GO:0005525
Glsi04g1513 193 ProSiteProfiles small GTPase Arf family profile. 11 177 - -
Glsi04g1513 193 PANTHER ADP RIBOSYLATION FACTOR-RELATED 8 173 IPR024156 GO:0005525
Glsi04g1513 193 SMART sar_sub_1 9 177 IPR006689 GO:0003924|GO:0005525
Glsi04g1513 193 Pfam ADP-ribosylation factor family 6 176 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1513 Glsi-ChrGlsi04 20035768 20049292 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g1513 04 20035768 20049292 Glsi04g1513 04 20035768 20049292 ECH