Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1425 ATGTCTCTCTCCCTTCCTATCTCTTCTCCCCATCACATTTCTAGCTCTCTCCGCTTTCCAATCCCACCTCTCTCGTTATACCCTTCTTTTCTGTATTACTATCATCCCCAATTCCCACATGGGCATAGCACCAACTTTATTCTTTGCCATGACAAACTTAGCCAGAGGGCAAATTTTGCTTTTGCTTCCATGAAGACTGGACGAGGTGGGGTTTTCAGGTGTTCTTCCTTTTCCAGCTCGGGAGGCAATGGAGGTGGAGAATGTTATAATGGAAGTGAAGGGGGAGAAGAAGATGATGAAGAACAGAGGGTTAGTAGTGAGGAAGAAGCGGTCAAAACAGAGGGAGCCTTTGGCTCTTTACTTTTGCCTGAAAGATGGGATGTCTTGGGTCTGGGTCAAGCCATGGTAGACTTTTCTGGCAAAGTTGATGATGTGTTCTTGAAGAAATTGGGGTTAGAGAAGGGAACAAGGAAGGTTGCAAATCACGAGGAAAGGGGTAGAATTTTGGGGGCTATGGATGGTTGCAGCTACAAAGCTGCTGCAGGTGGATCTCTTTCTAATAGCTTAGTTGCCTTGGCAAGACTTGGCAGTCGTCCCATTGGAGGTCCTATCATAAATGTGGCAATGGCAGGCAGTGTAGGGAGTGATCCTTTGGGTGGCTTCTACAGGGCAAAATTGAATCGAGCAAATGTACAATTTCTTTCTGCACCTATCACAGATGGGACAACGGGAACAGTTGTAGTTCTCACAACTCCAGATGCCCAACGCACAATGGTTGCATATCAGGGTACATCTTCAACTGTGAATTATGACACCTGCTTGGCTAACATAATTCCCAAGAGCAACATTCTTGTTGTTGAAGGGTATCTATTTGAACTTCCTGATACTATTAAAACAATAACAAAAGCATGTGAGGAAGCACGCAGGAATGGTGCCTTGGTTGCAATAACGGCTTCAGATGTCTCCTGTATTGAGAGACACTTTGATGATTTCTGGGAAATTATTGGGAACTATGCAGACATCATCTTTGCAAATAGCGATGAAGCGAGAGCTCTCTGTAATTTTATTCCAAAGGAAAGCTCTGCTTCAGCCACAAGGTATTTGAGCCTCTTTGTTCCCCTAGTATCTGTGACTGATGGACCTAGCGGCTCTTATGTAGGAGTAAAAGGAGAAGCTGTATATATTCCTCCTTCTCCATGTGTGCCAGTAGACACTTGTGGTGCAGGCGATGCTTATGCATCTGGGTTTCTGTATGGGGTTTTAAGAGGTGTATCAGATGTGAAAAGAATAGGTAAAATAGCAGCTAGTGTTGCAGCCACTGTTGTTGGGCAACAGGGAACTCGGCTTAGGATTTCAGATGCAGTCAAATTGGCCGAGTCTACTGCATTTCAACTTGATAATTCCATTGTTCGATCTGATGTTGGTACTGATCATATATCCAACTTCTGA 1449 0.4438 MSLSLPISSPHHISSSLRFPIPPLSLYPSFLYYYHPQFPHGHSTNFILCHDKLSQRANFAFASMKTGRGGVFRCSSFSSSGGNGGGECYNGSEGGEEDDEEQRVSSEEEAVKTEGAFGSLLLPERWDVLGLGQAMVDFSGKVDDVFLKKLGLEKGTRKVANHEERGRILGAMDGCSYKAAAGGSLSNSLVALARLGSRPIGGPIINVAMAGSVGSDPLGGFYRAKLNRANVQFLSAPITDGTTGTVVVLTTPDAQRTMVAYQGTSSTVNYDTCLANIIPKSNILVVEGYLFELPDTIKTITKACEEARRNGALVAITASDVSCIERHFDDFWEIIGNYADIIFANSDEARALCNFIPKESSASATRYLSLFVPLVSVTDGPSGSYVGVKGEAVYIPPSPCVPVDTCGAGDAYASGFLYGVLRGVSDVKRIGKIAASVAATVVGQQGTRLRISDAVKLAESTAFQLDNSIVRSDVGTDHISNF 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1425 482 Gene3D - 123 456 IPR029056 -
Glsi04g1425 482 SUPERFAMILY Ribokinase-like 126 449 IPR029056 -
Glsi04g1425 482 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 404 417 IPR002173 GO:0016301
Glsi04g1425 482 MobiDBLite consensus disorder prediction 78 105 - -
Glsi04g1425 482 FunFam Putative sugar kinase slr0537 129 453 - -
Glsi04g1425 482 Pfam pfkB family carbohydrate kinase 177 449 IPR011611 -
Glsi04g1425 482 CDD adenosine_kinase 125 450 - -
Glsi04g1425 482 PRINTS Ribokinase signature 375 386 IPR002139 GO:0016301
Glsi04g1425 482 PRINTS Ribokinase signature 334 349 IPR002139 GO:0016301
Glsi04g1425 482 PRINTS Ribokinase signature 177 196 IPR002139 GO:0016301
Glsi04g1425 482 PANTHER SUGAR KINASE 123 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1425 Glsi-ChrGlsi04 17308631 17315677 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g1425 04 17308631 17315677 Glsi04g1425 04 17308631 17315677 ECH