Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1333 ATGAGATGCAATGCGTGCTGGCGAGAACTAGAAGGGCGTGCCATTTCCACAACATGTGGTCACCTTTTGTGCACAGAAGATGCCCATAAGATATTAAGTAATGATGGAGCATGCCCAATTTGTGATCAAGTGCTTTCGAAAAGTCTCATGAAACCTGTGGATGTCAATCCTAATGATGAATGGGTAAATATGGCCATGGCGGGAGTATCTCCGCAGATATTGATGAAGAGTGCTTACAGAAGTGTGATGTTCTTCATCGGGCAAAAGGAACTGGAGATGCAGTATAAAATGAACAGGATTGTAGCTCAATGCCGGCAGAAATGTGAGATGATGCAAGAAAAATTTACAGAAAAGCTAGAGCAGGTGCATACTGCCTACCAAAAAATGGCCAAGAGGTGTCAGATGATGGAGCAGGAAATTGAGAGCTTGTGCAAGGACAAGCAAGAACTCCAGGAAAAATTTGCTGAAAAATCTAGGCAGAAGAGAAAATTAGATGAAATGTATGATCAGTTAAGGAGTGAGTATGACTCAGTGAAACGAGCTGCCATACAACCTGCAAGCAACTTTTATTCCAGAAATGAGCCCGATTTGTTCTCCAACCCGCCTAACATGATGGATGAGAGAGAAACTGGAAGAAAAGGTTGGCCGGTTATCACTCCTGACACTCCAGGGCCAAGAGAGGATGTATGGCCAGCCAGACAGAATAGCAATAACTCGGGCCACTTCGATATCTCTGTTGGCTCACCGGCAAAGCAAGGAGTTCTTGCGGGGGATGCAGGAAACAGAAGGGTTGGTGCTCACCCTGTTTATGGAGCTAGTGCTACTGGTAATCCATCACAGACTTTAAGGAACTTGTTACTGTCTCCAATAAAACGGCCTCAGCTCTTACGTAACCGCCCTCATCTATTCACGTTGTAG 918 0.4499 MRCNACWRELEGRAISTTCGHLLCTEDAHKILSNDGACPICDQVLSKSLMKPVDVNPNDEWVNMAMAGVSPQILMKSAYRSVMFFIGQKELEMQYKMNRIVAQCRQKCEMMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLCKDKQELQEKFAEKSRQKRKLDEMYDQLRSEYDSVKRAAIQPASNFYSRNEPDLFSNPPNMMDERETGRKGWPVITPDTPGPREDVWPARQNSNNSGHFDISVGSPAKQGVLAGDAGNRRVGAHPVYGASATGNPSQTLRNLLLSPIKRPQLLRNRPHLFTL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1333 305 PANTHER E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG 1 304 - -
Glsi04g1333 305 SUPERFAMILY RING/U-box 2 50 - -
Glsi04g1333 305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 53 IPR013083 -
Glsi04g1333 305 Coils Coil 126 181 - -
Glsi04g1333 305 FunFam E3 ubiquitin-protein ligase CCNB1IP1 homolog 1 53 - -
Glsi04g1333 305 Pfam zinc-RING finger domain 2 43 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1333 Glsi-ChrGlsi04 15127934 15130511 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g1333 04 15127934 15130511 Glsi04g1333 04 15127934 15130511 ECH