Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1247 ATGCCTTTCTCCCCCAAGTCATTCCACGCTCGTCCAGTCGCATTGTCATCTCGTAGATCCGCGTTCCTTATCATCTCCTCCCTCCTGATCGGTCTCTCAGGTTTCGTGTTCGGAATCACCGCTTTTCTGAAGCCAATTTCTGGGTATAAATGCTTGAATAGCCACCCTAAATCGATTAGAGTGGTTTGGGAACACGGTAGCGGAGGCAGCGGCGGCGTCGTTGGTGCGAGCGATGGGAATCCTGGGGTTGGAAATAGGCATAAAGTCATGGGTTTTGTGGGTATTCAGACCGGATTCGGATCTGTGGGTAGGCGACAAGCATTGAGGAAGACGTGGATGCCTTCGGATCGGCAAGGGCTCGAACGCTTGGAAGAAGCCACTGGCTTAGCTTTTCGGTTTATCATTGGTAGAACAAATGACAAATCAAAGATGTCAGCACTTCAGAGGGAAGTAGCAGAATATGATGATTTCATTCAATTGGATATTGAAGAGGAGTACAGTAAGCTCCCATATAAAACGTTAGCTTTCTTCAAAGCTGCCTATGCACTTTATGAAGCTGATTTTTATGTCAAAGCTGATGATGATATATATTTACGGCCAGATCGTCTTTCATTGCTATTGGCAAAAGAGCGGTCTCACCCACAGACTTACATAGGATGCATGAAAAAGGGCCCTGTTTTCACTGACCCAAAACTCAAATGGTATGAGCCACTATCTCATTTGCTTGGGAATGAGTATTTTCTTCATTCTTATGGACCTATATATGCTCTTTCTGCTGATGTTGTTGCAAGTTTGGTAGCTCTTAGGAATAACAGTTTCCGGATGTTCAGCAATGAGGATGTTACTATTGGAGCTTGGATGCTCGCAATGAATGTCAACCATGAGAATACTCATGAACTGTGTTCTCCAGACTGTACGTCCACGTCTATTGCTGTGTGGGATATTCCAAAATGTTCAGGCCTCTGTAATCCAGAACAGAAAATGTTGGAACTCCATCAAAAGGAGAGCTGCTCAAAGAGCCCAACTCTGGAATCTGATGAGTAG 1044 0.4492 MPFSPKSFHARPVALSSRRSAFLIISSLLIGLSGFVFGITAFLKPISGYKCLNSHPKSIRVVWEHGSGGSGGVVGASDGNPGVGNRHKVMGFVGIQTGFGSVGRRQALRKTWMPSDRQGLERLEEATGLAFRFIIGRTNDKSKMSALQREVAEYDDFIQLDIEEEYSKLPYKTLAFFKAAYALYEADFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLSHLLGNEYFLHSYGPIYALSADVVASLVALRNNSFRMFSNEDVTIGAWMLAMNVNHENTHELCSPDCTSTSIAVWDIPKCSGLCNPEQKMLELHQKESCSKSPTLESDE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1247 347 FunFam Hexosyltransferase 88 319 - -
Glsi04g1247 347 Pfam Galactosyltransferase 104 297 IPR002659 GO:0006486|GO:0016020|GO:0016758
Glsi04g1247 347 Gene3D - 92 334 - -
Glsi04g1247 347 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 87 305 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1247 Glsi-ChrGlsi04 12760448 12767926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1247 6 347 Glycosyltransferase AT1G53290 72.543 0.0 530
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0971 14 11089324 11092459 Glsi04g1247 04 12760448 12767926 CCT
Glsi04g1247 04 12760448 12767926 Glsi04g1247 04 12760448 12767926 ECH