Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1163 ATGGCTACCACCAACGCTTTCCTCACCACTCCCACCAAAACCCCATCCGACAAATCGGCTTCCATGTCTAGGAAGCACCCACATTCCAACTCTCTCGATTCCTCTTTTTCTCGTTCTTCCTCCAACTCCGAATTCAAGTCTCGATTCGAGGCCTACAACCGACTTCAGGCCGCTGCAGTGGCCTTCGGTGAGAAGCTCCCGATTCCTGAGATCGTCGCCCTCGGAGGCCAATCCGATGGCAAGAGCTCTCTCCTTGAAGCCCTCCTCGGGTTCCGATTCAATGTACGCGAGGTTGAGATGGGTACTCGTAGGCCCCTCATTCTCCAAATGATTCACGATCCCACTGCTCTGGAACCTCGATGCCGGTTTCAGGAGGAGGATTCAGAAGAGTATGGAAGCCCTGTCGTTTTGGCATCTACAATTGCGGACATTATAAAGTCTCGAACAGAGGCACTTTTGAAGAAAACTAAGACATCAGTATCTCCTAAGCCAATTGTAATGAGAGCAGAATATGCTCATTGTCCTAACCTCACTATTATTGATACCCCCGGCTTTGTTCTGAAGGCCAAGAAGGGAGAACCAGAGAACACACCTGAGGAAATTCTTTCAATGGTGAAATCGTTGGCTAGTCCTCCCCATCGCATACTCTTGTTTCTTCAGCAAAGTAGTGTGGAGTGGTGCTCATCCTTATGGTTGGATTCCATTCGTGAAATTGATCCAACATTTAGGCGGACAGTGATTGTTGTCTCCAAATTTGATAATCGTCTCAAGGAATTTAGTGACCGATGGGAGGTGGATCGTTATTTAAGTGCAAGTGGTTACCTTGGAGATAGCACTCGCCCTTTTTTTGTGGCCCTGCCAAAAGATAGGGGAAATGTTTCAAATGATGAGTTTCGCAGGCAGATTTCTGAGGTGGACTCAGAGGTTCTGCGTCATCTGCGAGAGGGCGTCCAGGGAGGATTTGATGAAGAAAAGTTTAAGCCCTATATTGGTTTTGGCTGTCTGAGAGATTATTTGGAATCTGAGCTTCAGAAAAAATACAAAGAAGCTGCACCAGCAACTCTAGCGTTACTTGAGCAGCGCTGCAGTGAAGTCACTTTTGAACTTGCTAGAATGGACTCAAAAATTCAGGCCACTTCAGATATTGCTCATCTTAGGAAATCGGCAATGTTGTATGCAGCCTCTATCAGCAACCACGTGGGTGCGTTGATTGATGGTGCTGCAGATCCTTCCCCTGAACAATGGGGGAAAACAACACCAGAAGAGCAGTCACAAAGTGGTATTGGGGTTTGGCCTGGGGTCATTGCAGATGTAAAGCCCCCAAATGCTACTCTTCGCCTCTATGGAGGAGCTGCTTTTGAGAGGGTGATGCATGAATTTCGCTGTGCTGCATATTCCATTGAATGCCCCCCAGTGTCAAGGGAAAAGGTTGCAAATATATTACTTGCCCATGCGGGGCGAGGTGGGGGAAGAGGAGTAACAGAGGCTGCTGCAGAGATTGCACGTGCTGCTGCTAAATCATGGCTTGCACCTCTTCTTGACACTGCTTGTGATCGGCTTGCTTTTGTTTTGGGAAGTTTATTTGATTTGGCTCTAGAAAGAAATTGTAGTGATGATTCAGAACATGGGATTGAAACTGGAAACATGGATGGCTATGTCGGTTTTCATGCTGCTTTAAGGCATGCTTACAGTCGCTTCATAAGGGATCTTGCTAAGCAGTGCAAGCAGTTAGTTAGGCACCACCTTGATTCAGTTACCAGTCCATACTCACAGGTCTGCTATGGTAATGACTTTCAACTATGTTATGGCCTAAATGCTACCTCATTTAACAAATTGAGCCAGGCCTCTGCTGCTTCTTTTTTTCTTGAGTTGAGTGATACGAAGTCGGCTTCCCATGATGTAACGATGGATCAGGAAAATTTACCCCCAGAAAAGAATGCACAGGAAACTACACCAGGTAAAGCTGCAGAAGCTAGAGAAGCTTTGCGAGAATGCCAAATGACTGTCCCTGAGACGCCATCTCCTGATCAGCCAGGTGATCCTGTATATTGTGGGGCTAAAAAAGAGCTTGGAAATTGCAATGACAATGGACCAAGAAAGAGAATGTCGAGAATGACAGGAAATAGCAAAAATGCTGATCATATAAGAGTGCAAAATGGTGGTCTTTTATTTGGAAATGGGGATAGATCAGGTTCAGCTTACTCTGAAATATGTTTCTCAGCTGCCCAGCATTTTGCACGTATACGCGAAGTTCTTGTTGAGAGAGGCGTGGCATCAACATTAAATTCTGGATTTCTAACCCCTTGCCGAGATAAGCTTGTAGTGGCTCTTGGGTTAGAGTTATTTGCTGTGAATGATGAGAAGTTCATGGACATGTTTGTTGCCCCTGGTGCCATAGATGTACTGCAGAATGAACGAGAGTCTCTTCTGAAGCGTCAGAAGATACTCCAGTCTTGCTTGAATGAGTTCAAAAATGTTGCTCGGGCACTTTGA 2493 0.4601 MATTNAFLTTPTKTPSDKSASMSRKHPHSNSLDSSFSRSSSNSEFKSRFEAYNRLQAAAVAFGEKLPIPEIVALGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMIHDPTALEPRCRFQEEDSEEYGSPVVLASTIADIIKSRTEALLKKTKTSVSPKPIVMRAEYAHCPNLTIIDTPGFVLKAKKGEPENTPEEILSMVKSLASPPHRILLFLQQSSVEWCSSLWLDSIREIDPTFRRTVIVVSKFDNRLKEFSDRWEVDRYLSASGYLGDSTRPFFVALPKDRGNVSNDEFRRQISEVDSEVLRHLREGVQGGFDEEKFKPYIGFGCLRDYLESELQKKYKEAAPATLALLEQRCSEVTFELARMDSKIQATSDIAHLRKSAMLYAASISNHVGALIDGAADPSPEQWGKTTPEEQSQSGIGVWPGVIADVKPPNATLRLYGGAAFERVMHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGVTEAAAEIARAAAKSWLAPLLDTACDRLAFVLGSLFDLALERNCSDDSEHGIETGNMDGYVGFHAALRHAYSRFIRDLAKQCKQLVRHHLDSVTSPYSQVCYGNDFQLCYGLNATSFNKLSQASAASFFLELSDTKSASHDVTMDQENLPPEKNAQETTPGKAAEAREALRECQMTVPETPSPDQPGDPVYCGAKKELGNCNDNGPRKRMSRMTGNSKNADHIRVQNGGLLFGNGDRSGSAYSEICFSAAQHFARIREVLVERGVASTLNSGFLTPCRDKLVVALGLELFAVNDEKFMDMFVAPGAIDVLQNERESLLKRQKILQSCLNEFKNVARAL 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1163 830 PANTHER DYNAMIN 50 824 IPR022812 -
Glsi04g1163 830 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 359 IPR027417 -
Glsi04g1163 830 PRINTS Dynamin signature 240 256 IPR022812 -
Glsi04g1163 830 PRINTS Dynamin signature 68 86 IPR022812 -
Glsi04g1163 830 PRINTS Dynamin signature 93 110 IPR022812 -
Glsi04g1163 830 PRINTS Dynamin signature 171 188 IPR022812 -
Glsi04g1163 830 Gene3D - 36 400 IPR027417 -
Glsi04g1163 830 CDD DLP_1 66 352 IPR001401 GO:0003924|GO:0005525
Glsi04g1163 830 FunFam Dynamin-related protein 5A 37 403 - -
Glsi04g1163 830 MobiDBLite consensus disorder prediction 631 647 - -
Glsi04g1163 830 Pfam Dynamin family 71 251 IPR045063 -
Glsi04g1163 830 SMART dynamin_3 45 288 IPR001401 GO:0003924|GO:0005525
Glsi04g1163 830 MobiDBLite consensus disorder prediction 25 40 - -
Glsi04g1163 830 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 65 352 IPR030381 GO:0005525
Glsi04g1163 830 MobiDBLite consensus disorder prediction 1 18 - -
Glsi04g1163 830 MobiDBLite consensus disorder prediction 631 661 - -
Glsi04g1163 830 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1163 Glsi-ChrGlsi04 10756067 10761061 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g1163 04 10756067 10761061 Glsi04g1163 04 10756067 10761061 ECH