Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0937 ATGGAGTCGATACTGGCGAGAGCATTGGAGTACACTCTCAAGTACTGGCTCAAATCCTTCTCTAGAGATCAGTTCAAGTTGCAGGGTCGGACAGTGCAGCTCTCTAATTTAGATATAAACGGGGATGCATTGCATTCCAGTGCTGGATTGCCACCGGCTCTGAATGTAGCGACAGCCAAAGTCGGGAAATTGGAGATCGTGCTTCCTTCGGTAAGCAATGTGCAAATGGAGCCAATCACTCTGCAAATTGACCGACTTGATTTGGTTCTTGAGGAGAATTCTAATTTCGATGCCTCTGCAAGTCCTAAGAGTACTGCCCCATCTACTGCCTCCACAAAAGGTAGCGGTTATGGTTTTGCTGATAAGATTGCAGATGGAATGACTGTACAGATTCATACAGTTAATCTATTACTTGAAACTCGTGGGAGTGCTTCTCGCCAAGGTGGAGCAACTTGGGCACCACCTATGGCATCTATCACCATATGCAACCTTTTGCTGTATACCACAAATGAAGACTGGCAGGTTGTAAATCTTAAGGAAGCACGGGAGTTCTCCAGTAACAAGAAGTACATATATGTGTTCAAAAAACTTGAATGGGAATCTTTGTCTATTGATCTTTTGCCACATCCTGACATGTTCACGGGTTCTACTTTAGGCTGCTCTCAGGAGAGAGCAAACCTGAGAGATGATGATGGTGCCAAGCGAGTTTTTTTTGGAGGCGAGCGATTCATAGAAGGAATATCGGGCGAGGCATATATCACAATTCAGAGAACTGAATTAAACAGTCCACTCGGGCTTGAGGTTCAATTACACATTACTGAAGTTGTATGCCCTGCACTAAGTGAACCAGGACTGCGTGCTCTTCTCCGCTTTATGACGGGGTTATATGTCTGTCTAAATAGGGGAGATGTTGATTTTAAGGCTCAGCGATCCACAGAAGCAGCTGGGCGCTCTCTTGTCTCTATTGTTGTGGACCATATATTTCTTTGCATTAAAGATACTGTTCCTCTGCAGAAACATGTTATTTTCATTCTTTCAGAAGCAGAAAAGTTATATGATTTGATGCACTGCTTGCAGGCCAGCATTTCTGAAGATGATGACAACAACTTAACCAGGATTACAATTGGTGGACTATTTCTGAGGGATACATTTTCACGCCGTCCATGTACCTTGGTGCAACCGTCAATGCAAGCTGTCACAAGAGAGGCTTTCCATGTGCCAGAATTTGCTAGGAGCTTTTGCCCTCCAATATATCCACTAGGAGAACAGCAGTGGCAATTAATTGAGGGTACTCCTCTAATCTGCCTTCATTCTCTGCAGATCAAGCCTTCTCCAGTTCCACCATCCTTTGCTTCTCAAACAGTTATTGACTGTCAGCCTCTAATGATTCATCTCCAAGAAGAATCCTGCCTAAGGATATTTTCTTTCTTAGCTGATGGTATCGTTGTCAATCCTGGCGTTATTTTGCCAGATTTCTCAGTAAATTCTTTTATTTTCACTCTCAAGGGACTAGATCTTACAGTTCCTTTGGACAAGGCCAAATTGGATATTCCTGAAAGCAACATAAACAATACAGTTCAGAGCTTCTTTTCTGGAGCAAGGCTTCATATTGAAAGCCTTTTCTTTTCAGATTCACCCTCTTTGAAACTAAGAATGCTGAACTTGGAGAAGGATCCTGCTTGTTTCTGTCTTTGGGAAGGTCAACCAATTGATGCTAGCCAGAAGAAGTGGACTGCTAGAGCGTCACATCTTACTTTGTCTCTGGAAACATGCACGGGCACAACTGGGTGTAAGAATTCTCTTGGATGGACTGCAGGATTATTGAGATGTGTTGATCTCAAAGATGCTTGCATGGAAGTAGCTATGGCAACGGCTGATGGCAGTCCATTGATAGAAGTTCCTCCTCCGGGGGGTATTGTCAGGGTTGGAGTTGCTTGTGAACAATATTTATCCAACACTTCTGTTGAACAATTATTTTTTGTCCTTGATCTCTATGCTTATTTTGGGAAAGTTATTGAGAAAATAGCGATAGCTGGAAACAGTAAACAATTGCAGAATATTAGGAACAAATCTTTTAGTGAAAAGCTGATAGACAGAGTTCCTAGTGGAAAGCCAAAGGACAAAGTTCCCAGTGACACTGCTTTCATTGGAGATGATCTGTTCATTAGTGCCAGTCATAGAACTCTTGGTGGTGCCATTGTTGTTTCATCCACTTTACGCTGGGAGAGTGTTGAGATAGATTTTGTGGATGGTGAGGGGCACATCGCATGTGAAAATTGCTCTTTTTTTAATTCTGCTGAAAATCTTCCCTCAATTAGTGATAATGGATACCCTCAACTAAAAGTTGTTTTTTGGGTGCATAACGAAAAGAACCATCTATCAAATGGAACTGCTAATTTGTTTCCTTTTTTGGATATAAGCATGGTGCATGTCATTCCATTATATGAACAAGACATAGAGTCTCATAGTTTGAATGTCTCAGCTTCTATAAGTGGTGTTCGCCTTGGGGGAGGAATGAATTATGCTGAAGCCCTCCTACATCGCTTTGGAATTCTTGGGCCTGATGGTGGCCCTGGAAAGGGACTTTGTGAAGGACTAGAAAACTTACAATCAGGGCCATTGTCAAAGCTTTTTAAGGCAGCACCTCCCATTGTTGCCAATTCAGAAGATGCTGAAAGTATGAGAAGGGGGAAAGAAACCAACTTTTTACACTTGAAGAAGCCAGACGATGTGGATGTTGCTGTAGAATTGAGAGACTGTTTATTTGCTCTTGAAGGTGCTCAAGAGATGGCTGAAAGGTGGTGGTTCTCCAGCCACGAAGATGGAATTGAGGATTTTCTTGCTGCTTTCAGAAATGAAAGATCTTTGGGGAAAGGTCCAAAAGAGGATCAAGAATCTGTTAAGCAGATTGAGGCGGTTGTAACCAAGGATGAGTTTCAGCACCTTGCTTTTCTGTGCAAATCTGAAATTGATTCAATGGGCCGGATAACAGCTGGAATTCTACAGTTGCTGAAGTTGGAAGGTTCTGTTGGCCAGTCTGCAATAGATCAATTAAGCAACCTAGGAAGTGAAGGAATTGACAAGATTTTCTCTCCATCGTCAAACCACATAAACGAATGCTCACACAAAACTATGAAACCAACATTAACTTTGCTGGAGGAAGCAGTTGTGGATTCACAGGCCAAACTCAACGCTTTAATTACTGAAGTTGGCACTTCAGAGACTTCCTCACAGCACCTTGCTGTTGTCAACGAAGTCCGTCAAAAGTTTGAGACTATGCAAGATTTATTGACGAAGTTGAGGAATCAACTTTAA 3315 0.4235 MESILARALEYTLKYWLKSFSRDQFKLQGRTVQLSNLDINGDALHSSAGLPPALNVATAKVGKLEIVLPSVSNVQMEPITLQIDRLDLVLEENSNFDASASPKSTAPSTASTKGSGYGFADKIADGMTVQIHTVNLLLETRGSASRQGGATWAPPMASITICNLLLYTTNEDWQVVNLKEAREFSSNKKYIYVFKKLEWESLSIDLLPHPDMFTGSTLGCSQERANLRDDDGAKRVFFGGERFIEGISGEAYITIQRTELNSPLGLEVQLHITEVVCPALSEPGLRALLRFMTGLYVCLNRGDVDFKAQRSTEAAGRSLVSIVVDHIFLCIKDTVPLQKHVIFILSEAEKLYDLMHCLQASISEDDDNNLTRITIGGLFLRDTFSRRPCTLVQPSMQAVTREAFHVPEFARSFCPPIYPLGEQQWQLIEGTPLICLHSLQIKPSPVPPSFASQTVIDCQPLMIHLQEESCLRIFSFLADGIVVNPGVILPDFSVNSFIFTLKGLDLTVPLDKAKLDIPESNINNTVQSFFSGARLHIESLFFSDSPSLKLRMLNLEKDPACFCLWEGQPIDASQKKWTARASHLTLSLETCTGTTGCKNSLGWTAGLLRCVDLKDACMEVAMATADGSPLIEVPPPGGIVRVGVACEQYLSNTSVEQLFFVLDLYAYFGKVIEKIAIAGNSKQLQNIRNKSFSEKLIDRVPSGKPKDKVPSDTAFIGDDLFISASHRTLGGAIVVSSTLRWESVEIDFVDGEGHIACENCSFFNSAENLPSISDNGYPQLKVVFWVHNEKNHLSNGTANLFPFLDISMVHVIPLYEQDIESHSLNVSASISGVRLGGGMNYAEALLHRFGILGPDGGPGKGLCEGLENLQSGPLSKLFKAAPPIVANSEDAESMRRGKETNFLHLKKPDDVDVAVELRDCLFALEGAQEMAERWWFSSHEDGIEDFLAAFRNERSLGKGPKEDQESVKQIEAVVTKDEFQHLAFLCKSEIDSMGRITAGILQLLKLEGSVGQSAIDQLSNLGSEGIDKIFSPSSNHINECSHKTMKPTLTLLEEAVVDSQAKLNALITEVGTSETSSQHLAVVNEVRQKFETMQDLLTKLRNQL 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0937 1104 Pfam N-terminal region of Chorein or VPS13 1 100 IPR026854 -
Glsi04g0937 1104 Coils Coil 1083 1104 - -
Glsi04g0937 1104 PANTHER UNCHARACTERIZED 966 1102 IPR026728 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0937 Glsi-ChrGlsi04 7479143 7489509 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0937 04 7479143 7489509 Glsi04g0937 04 7479143 7489509 ECH