Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0896 ATGGCTTTGGTTGATATAACCAAATCTTGCATCGATTCCATTAGACAGATGTCAGAGCATATTGAAGATGCTATTGTTTACTTAGATGCTGGGTCTACAGAGAGTTTCCAGTTTATTGATGCATACCCTGTACTTCTGGATCTTGGAGCACGAGCTATTTGCAGTTTGGAAAACATGTGTTCACTTGATGCGGTGGTTGATTGGAACTCATATTCGAATCCTGCGGGGAAACTTGTGGTAATCACATCGCGTCTACTAAGTGATGCACATCGGTATATTTTACGTTGCCTGAGCACACATCGAGTTGTCCATCGTTGTATTATATTTACATCTATCTCAGAGATAGCTCATTCATCATTTCCTGATTCACCTCTGGGACCAGATGCATATCAGGAATATGAATCCTTACTTGTTCAAGATTATGAAGAACTAGTTAAGAAATCTGGGACAAATTCTAGGCAGTTTGGTAGCAACTTACAAGGAAATTTAAAATTTGAAGGTGAAGGACGGTTTCCTTCCGGTGGAAAGGATGTCTCTCATCTTGAAGCTAGTCCAAGTAGAACAGATTTTGATGAAGATAATCGATTATACAACATTGAAGATGTTGGACCAAAATTGGTTGTTTCCATTAATCATTTCCCCATGATTTTATGTCCCATTTCACCAAGAGTATTTGTTTTACCTTCAGAAGGATTGGTAGCTGAAGCTTACTTATCAGCTGAACATGAAGATTCCATTAGTCCAGGGTTGCCTCCCTTGAGCACTGGTGCGCTCTCTTATGCCGATGATGTGCCTCCAGGGGCAACTCTGACTGCACACTTTCTCTACCATTTGGCATCCAAGATGGACTTGAAAATGGAAATTTTCTCCCTTGGTGATATGTCAAAAACTGTTGGGAAGATTTTGACAGACATGTCCAGTCTGTATGATGTAGGCCGGCGTAAACGATCAACTGGGCTGTTACTCATTGATCGCACACTTGATCTTCTTACTCCTTGCTGTCATGGGGACTCCCTAGTTGATCGTATGTTTTCGTGTTTGCCCCGTAGGAATAGAACAACTTCCCATCCCCAAGTTAAAGGTTCAGGATCCCAACTCAAAGATAGCACTTCCTACCTGCAACGTGCTCCCTTAGATGTTCAGATACCACTTGTAAAGATCCTAAATGAAGAAGATTGCAAAGTAGACAATTTTCGTCTTTTAGAAAGTGTTGAAGGTTTTCTTTGTGGATGGAATTCCAGTTACTCTGATTCTCAGATTGCAGATTTAATTAATCTTAGTCAGACAATTCATGAAAAGCCTCTTCTCTCTGACATAGAGATGCTTACTGGGTCTTTAATCTCCTCTGAAAATTTTCGTGGAACGCCATTCTTGGAAGCTTTACTAGATAGAAGAACAAAAGATGGAGCCCTACTGGTAAAGAAATGGTTACAAGAAACTCTGCGCAGGGATAATGTTGCTGTGAACGTCAAAACTCGTCCTGGTCTTGTTACAAAACCAGAGTTGCAAGTGATGATCAAAGCATTGGCCAGTAGCCAATCATCTCTAGTGAAAAACAAAGGAATTATTCAGTTAGCTTCTGCCACTCTATTGGCCCTTGAGGAATCGACTTGCGCCAAATGGGATGCATTTATCAGTGCTGAGAAGATTCTGAGTGTGAGTTCTGGAGAAACCAGTCAAAGTCTTGCTGCTCAAGTTGGTGATCTCATCAATAAGAGTGCTTTATTGGGATCACATGGAAATAAAGTAAAAAAGGAGCTCCCACAGGGGGTACTTTCTTTGCAAGATGCTTTGTTGTTGATGATTGTTGGATATATATTGGCTGGGGAGAATTTTCCAACATCTGGGTCTGATGGCCCATTTTCTTGGCAAGAGGAACGTTTGTTAAAAGAAGCTGTTGTAGATGCAATTCTTGAAAATCCATCAGGAGCCAAACTCAAGTTTCTAGATGGACTAACGGAAGAGCTTGAAGCTAAACTAAGCAAGTTTAGATCAGAAGAAACAATTGAAGAACCCTCAAAACAGCTAGATATTGATGATTTTGATGATGATCAGTGGGGTAAATGGGGGGATGAAGATGCTGATGATGATAATAAAAATGAGCAAGTGTATGGTGACATGCAGCTGAAGTTGGAGTTGCGTGATCGGGTAGATCACCTTTTTAAATTCCTTCATAAGTTGTCCAATTTGAAAAGAAAGAATATACCAATTAAGGATGGATCGTTGACCATGGAAGGTAATTTTGGTGAGGAGACCTACATGGGAAAAGGATTACTTTATAAGCTGCTAACAAGGGTGTTGAGCAAGTTTGATGTACCAGGGTTAGAATACCATTCCTCCACTGTGGGGCGGCTTTTTAAGAGTGGATTTGGAAGATTTGGCCTTGGTCAGGCAAAGCCCAGTCTTGCTGATCAAAATGTCATTTTGGTGTTCGTGATTGGGGGCATCAATGGACTTGAGGTACGTGAAGCTCAGGAGGCTTTGTCTGAAAGCGGAAGACCTGATATTGAATTGCTTGTTGGTGGAACAACTCTTCTTACGCCTGATGACATGCTTGGTTTACTATTAGGAGACTCCAGTTACCTTTGA 2589 0.4106 MALVDITKSCIDSIRQMSEHIEDAIVYLDAGSTESFQFIDAYPVLLDLGARAICSLENMCSLDAVVDWNSYSNPAGKLVVITSRLLSDAHRYILRCLSTHRVVHRCIIFTSISEIAHSSFPDSPLGPDAYQEYESLLVQDYEELVKKSGTNSRQFGSNLQGNLKFEGEGRFPSGGKDVSHLEASPSRTDFDEDNRLYNIEDVGPKLVVSINHFPMILCPISPRVFVLPSEGLVAEAYLSAEHEDSISPGLPPLSTGALSYADDVPPGATLTAHFLYHLASKMDLKMEIFSLGDMSKTVGKILTDMSSLYDVGRRKRSTGLLLIDRTLDLLTPCCHGDSLVDRMFSCLPRRNRTTSHPQVKGSGSQLKDSTSYLQRAPLDVQIPLVKILNEEDCKVDNFRLLESVEGFLCGWNSSYSDSQIADLINLSQTIHEKPLLSDIEMLTGSLISSENFRGTPFLEALLDRRTKDGALLVKKWLQETLRRDNVAVNVKTRPGLVTKPELQVMIKALASSQSSLVKNKGIIQLASATLLALEESTCAKWDAFISAEKILSVSSGETSQSLAAQVGDLINKSALLGSHGNKVKKELPQGVLSLQDALLLMIVGYILAGENFPTSGSDGPFSWQEERLLKEAVVDAILENPSGAKLKFLDGLTEELEAKLSKFRSEETIEEPSKQLDIDDFDDDQWGKWGDEDADDDNKNEQVYGDMQLKLELRDRVDHLFKFLHKLSNLKRKNIPIKDGSLTMEGNFGEETYMGKGLLYKLLTRVLSKFDVPGLEYHSSTVGRLFKSGFGRFGLGQAKPSLADQNVILVFVIGGINGLEVREAQEALSESGRPDIELLVGGTTLLTPDDMLGLLLGDSSYL 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0896 862 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 14 852 IPR001619 GO:0016192
Glsi04g0896 862 Gene3D - 219 337 IPR027482 -
Glsi04g0896 862 SUPERFAMILY Sec1/munc18-like (SM) proteins 206 336 IPR036045 -
Glsi04g0896 862 Gene3D - 719 856 IPR027482 -
Glsi04g0896 862 SUPERFAMILY Sec1/munc18-like (SM) proteins 770 856 IPR036045 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0896 04 6599555 6606822 Glsi04g0896 04 6599555 6606822 ECH