Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0893 ATGGAAGAGAAGCAGTTAGATTTAAATCAGCCACTTTTATCAGTCAGGCGGTTCTCATTAAAAGTGGCCTCTGAAGCTGATAATAAAAGGAAAACCAATGATTCATCGGTCAGACTACCTCCTCTCCTTGCTTACAAGTCAGAGCTGAAATCAGGTCCAGTGAGTAATCCTGGAACTGTTCCTTTTATATGGGAGCAGACTCCGGGAAGACCAAAGGACGAAAGCAAATCACAGACTGAATCTGTTGAACAGCATCCCATTACTCCAAACCTTCCACCTGGGAGGGTTTCAAAAGTTAAACGGAAAGATTCTGATCAAGTTTCAAAAGGAAGCACTATATCCAACTCTCAATATGTTATATCTTTAGATAAAAATGTAACCAAGCATGAGAGTCCAGAAGAGGCAATGCAGGAAAAGGCAAGTTCTGATTCAGCTGATGGAGATGAGGCCTATCAGGATGCACTTGATACCCTTTCCAGAACTGAATCATCCTTCATGAACTGTAGTGTGAGTGGCTTGAGTGGATTGGATGATCAGGAGTTCCAACCTTCAGGAAATTTCGCCAGGGATCAACAGGCTCGTAATTTCATGATTGGTCGGTTCTTGCCTGCAGCAAAGGCAGTTGCCTCTGGAACACCTCAATATACATCCAGGAAGCCACCTGTTGCACTAGAACAACCAAGACAAGTAAAGGAAGTAGTAAATGGACGAAGGTACAGTAAGTATAGGCAAATTGTTTTGTCACATTCTGCCCAAGATATTGGTAAGGAAGAAAGTGAGGATGAAGATGATAATTACAATGGGTCTGAAAACTATGAAGCCAAAGTTTGTGGGCTATTTCCTGGATTCTGCCTTTTGAATCCAATATCTGGATTCAGAATGGAGGATAGGGTGCTAAGTTCTGCAGCTCATGGGATGAAGGCTAAATCAACTGCTTCTCAAAGTGAAACTGGAAAAGAGCATGCTAGAACTGCATATAGTGAGAAAAAATCAGTAGATTCCCAGTATGGCTTTAGAGAAGACAGGCTCTGTGCTCCTGAAAATTTTAAAAATGGCATTGATCCACATCGAAGAGGTTGCAGCAAATTATCAGCTTGTGAGAGTACTCGATGTGAATCTGGCTGTTCAAGCCCTTTGGTTGAGAAAACTCTGTATGTAGATTCTGTACATAAGGGTAAGTCTAATTCAAGTTCATATTCTTCTGAAGTAAAGGGTCAAACCAATCACAGACAGGATGATTTTGAAACTTTGTCAGAAGATGGCAAAAGATTAAACATTGTGGATGAGAAGGCAACATTACAACCTAAAAGTTCAGATATGCAAATGATTATTAAAAATCATTCCAAGAAAAGTTCAGTGATCTCAAGTCAAAAAGTAGCTCAATGCACAACAGTCTCAGAAAATTTAGTGACTGGGAATCAAGAAAATTCTGATGGTCCAATTCAGAATAATGTGTCATGGAGAAGCTTGAGGTTGTCTGGTGTTGTAGAAGTTGATTCAAAGAGCCTGCTTGCTACCAAATCAATTGATCAAGAATGTACTCATGGCCTTACACAGGATCCAGGTACATTGCCTAGCTCAAAAGTGGTCAGTGATGCGAAGATGGACTTAGAAAGTCGATGGCTAATGAGATCAAGCAATCAAGAGAACTTGAATGCAATCTATTTTGAGCCTCCTCTTGCTATTCCTTTACCAAAAGCTCCATCAGAGTCTTGGCTTAAGCGTACTTTACCTACCATGTCCTCGAGGAATCTATCTTCCAGGTCTTATGTTGCTGCACGTAGTCAAACTATAAAGACAGCATCACTTGATCCTAAGTGGGAAACAATTGTTAAATCTTCTAAGAATGGCATTTTGCAGGCAGATGATGATGATATGGGTATTCCACTTCAGAGCTCTGGTGGCATATTCTTGCTTTTGATGATTTTAACGTCAATCATAATTGTAACAATGGTTTTGGTTGCTTGTGCTGACGGTGCTGAAAGCAAGAAAGATGATAAAAAAGGAGGGGATTGTGAATGTGATTGCGGATGTGTCGGCGGCGACTGTGGCGGCGGAGGCTGTGGCGGAGGTTGCGGGGGTTAA 2085 0.4125 MEEKQLDLNQPLLSVRRFSLKVASEADNKRKTNDSSVRLPPLLAYKSELKSGPVSNPGTVPFIWEQTPGRPKDESKSQTESVEQHPITPNLPPGRVSKVKRKDSDQVSKGSTISNSQYVISLDKNVTKHESPEEAMQEKASSDSADGDEAYQDALDTLSRTESSFMNCSVSGLSGLDDQEFQPSGNFARDQQARNFMIGRFLPAAKAVASGTPQYTSRKPPVALEQPRQVKEVVNGRRYSKYRQIVLSHSAQDIGKEESEDEDDNYNGSENYEAKVCGLFPGFCLLNPISGFRMEDRVLSSAAHGMKAKSTASQSETGKEHARTAYSEKKSVDSQYGFREDRLCAPENFKNGIDPHRRGCSKLSACESTRCESGCSSPLVEKTLYVDSVHKGKSNSSSYSSEVKGQTNHRQDDFETLSEDGKRLNIVDEKATLQPKSSDMQMIIKNHSKKSSVISSQKVAQCTTVSENLVTGNQENSDGPIQNNVSWRSLRLSGVVEVDSKSLLATKSIDQECTHGLTQDPGTLPSSKVVSDAKMDLESRWLMRSSNQENLNAIYFEPPLAIPLPKAPSESWLKRTLPTMSSRNLSSRSYVAARSQTIKTASLDPKWETIVKSSKNGILQADDDDMGIPLQSSGGIFLLLMILTSIIIVTMVLVACADGAESKKDDKKGGDCECDCGCVGGDCGGGGCGGGCGG 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0893 694 MobiDBLite consensus disorder prediction 126 146 - -
Glsi04g0893 694 MobiDBLite consensus disorder prediction 308 331 - -
Glsi04g0893 694 MobiDBLite consensus disorder prediction 391 405 - -
Glsi04g0893 694 Pfam Protein of unknown function (DUF688) 1 330 IPR007789 -
Glsi04g0893 694 MobiDBLite consensus disorder prediction 391 411 - -
Glsi04g0893 694 MobiDBLite consensus disorder prediction 108 124 - -
Glsi04g0893 694 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 1 615 - -
Glsi04g0893 694 MobiDBLite consensus disorder prediction 48 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0893 Glsi-ChrGlsi04 6564564 6569246 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1216 14 13211306 13213594 Glsi04g0893 04 6564564 6569246 CCT
Glsi04g0893 04 6564564 6569246 Glsi14g1230 14 13321416 13325625 CCT
Glsi04g0893 04 6564564 6569246 Glsi04g0893 04 6564564 6569246 ECH
Glsi11g2244 11 15750613 15752467 Glsi04g0893 04 6564564 6569246 ECH