Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0787 ATGGTGGCTGGAAATGGTCTGTTTTACCCTATTCTTGGTTTTGCGTCGTGTGTAGTTTTCATATATATGTCTTTTGGAGACTTGAGGCTGGGTTTTGAGGAAGAACCAAACTTGGCTTTTGTGGAGAGAAGTGGGACTCAGTTTATGTTAGATGGGAAAGCCTTCTACATAAATGGGTGGAACTCATACTGGTTAATGGTCCAGTCTGTGGATGATTATTCCAGACTCAGGGTTCGTGCAATCCTGCAGGCTGGTGCGAAGATGGGTCTAACTGTTTGTCGAACTTGGGCATTTAATGATGGTGATTACAATGCCCTTCAGATTTCCCCTGGGCGGTTCAATGAGCAAGTTTTCAAGGCATTGGATTATGTCATAGCAGAAGCGAGGCAACATGGCATTAGGCTGCTCCTTACCTTAGTTAATAACTTGCAAGCGTATGGTGGAAAGACTCAGTATGTCAAATGGGCATGGCAAGAAGGGATAGGGTTAAGCTCGTCCAATGATTCTTTCTTCTACGATCCATCAATCCGTAGTTATTTCAAGAATTACATCAAGACTGTTCTGACAAGGAAGAATACTATCACCGGAATTGAATATAGAAATGACCCCACCATATTTGGTTGGGAATTAATTAATGAACCTCGTTGCATGACTGATCCTTCGGGTGACACTCTCCAAGACTGGATAGAAGAAATGTCCACTTTTGTCAAATTGATTGACAAGAACCATTTGGTGACTGTTGGCCTTGAAGGTTTTTATGGTCCTAATGACCCAAAAGGCTTGACTGTCAACCCAGAGCAGTGGGCGTCCAGACTTGGATCTGATTTTATTCGCAATTCCGGAATTGCAAATATCGATTTCACCTCTGTTCATATCTATCCTGACCATTGGCTTCATAGGGAAAACTTTGAAGACAACCTAAAATTTGTCTCCAAGTGGATGCTTTCTCACATTGAAGATGGTGACAAAGTATTGAAGAAGCCTGTCTTGTTCTCCGAATATGGATGGTCAGACTTGAACAAGAACTTTTCACCAACTGACCGCGAAAAGATGTATAGAACAATTTTAGACATAATCCACAAATCTGCTAAGAAAAACAGGTCTGGAGCTGGTGCTTTAGTCTGGCAATTCTTTGTTGAAGGAATGGAGGAGTTTCGAGATGATTTCGGGATGGTCCCATGGGAAAGGTCGTCATTTCATTCACTATTTGTTGAACAATCATGCCGATTGGCCAGACTCACAGGATGGATTCAACAGGACAGAAGTTTCAAAGAAATGTGTAAGCAAAAATGGTAA 1296 0.419 MVAGNGLFYPILGFASCVVFIYMSFGDLRLGFEEEPNLAFVERSGTQFMLDGKAFYINGWNSYWLMVQSVDDYSRLRVRAILQAGAKMGLTVCRTWAFNDGDYNALQISPGRFNEQVFKALDYVIAEARQHGIRLLLTLVNNLQAYGGKTQYVKWAWQEGIGLSSSNDSFFYDPSIRSYFKNYIKTVLTRKNTITGIEYRNDPTIFGWELINEPRCMTDPSGDTLQDWIEEMSTFVKLIDKNHLVTVGLEGFYGPNDPKGLTVNPEQWASRLGSDFIRNSGIANIDFTSVHIYPDHWLHRENFEDNLKFVSKWMLSHIEDGDKVLKKPVLFSEYGWSDLNKNFSPTDREKMYRTILDIIHKSAKKNRSGAGALVWQFFVEGMEEFRDDFGMVPWERSSFHSLFVEQSCRLARLTGWIQQDRSFKEMCKQKW 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0787 431 PANTHER - 11 426 IPR045053 GO:0004553
Glsi04g0787 431 Gene3D Glycosidases 37 414 - -
Glsi04g0787 431 Pfam Cellulase (glycosyl hydrolase family 5) 77 376 IPR001547 GO:0004553|GO:0071704
Glsi04g0787 431 SUPERFAMILY (Trans)glycosidases 40 403 IPR017853 -
Glsi04g0787 431 FunFam Mannan endo-1,4-beta-mannosidase 6 37 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0787 Glsi-ChrGlsi04 5585833 5589750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0787 3 430 Glycoside Hydrolase AT2G20680 71.729 0.0 667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0787 04 5585833 5589750 Glsi04g0787 04 5585833 5589750 ECH