Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0733 ATGAGTCGCTACGATTCTAACCCTTTCGACGAAGAAGAGGTGAATCCCTTTGCGGATGGAGCAGCTAAAGGAAAAGGGTTCTCAGGGCAATCAAGTTATGGTGGAGGTGCTTTTTATACTACTAACCCTGGAAGTGTTCCCTCTGCAACATCTAAGCTCTCACCCCTTCCTCCCGAGCCTTATGATCGTGGGGCAACTATTGATATTCCTCTTGATTCCTCAAAGGACATCAAAACAAAGGAGAAGGAGCTTCGAGCTAAGGAGGCTGAATTGAAAAGGAGGGAGCAGGAACTAAAACGAAGGGAAGATGCTATAGCACGAGCTGGTATAGTTATAGAGGAGAAAAATTGGCCACCTTTTTTCCCTATCATTCATCATGACATTGCAAATGAAATACCAATACATCTTCAGAGGGTTCAGTATGTTGCATTCACAACATTTTTGGGTTTGGTTCTGTGCCTTTTATGGAATATTATAGCAGTTACTACTGCTTGGATCAAAGGGGAAGGTCCAACAATCTGGTTTCTTGCTATTATCTACTTTATTTCAGGGGTTCCAGGAGCCTATGTGTTATGGTATCGCCCTCTTTATCGTGCTATGAGGACAGATAGTGCTCTGAAGTTCAGCTGGTTTTTCTTGTTTTACCTGGTGCACATTGGCTTTTGCATATTTGCTTCAGTTGCTCCTCCAATTATCTTTAAAGGAAAATCTCTCACAGGTATTTTGCCTGCAATAGATGTGTTGGGCGACCATGCATTGGTTGGGATATTCTACTTCATTGGGTTTGGGTTTTTCTGCCTCGAGTCACTGCTGAGCATCTGGGTCATTCAGCAAGTATACATGTACTTCCGCGGCAGTGGCAAGGCTGCAGAGATGAAGCGTGACGCCGCGAGACAGACCATGATGGCAGCTCTATGA 918 0.4434 MSRYDSNPFDEEEVNPFADGAAKGKGFSGQSSYGGGAFYTTNPGSVPSATSKLSPLPPEPYDRGATIDIPLDSSKDIKTKEKELRAKEAELKRREQELKRREDAIARAGIVIEEKNWPPFFPIIHHDIANEIPIHLQRVQYVAFTTFLGLVLCLLWNIIAVTTAWIKGEGPTIWFLAIIYFISGVPGAYVLWYRPLYRAMRTDSALKFSWFFLFYLVHIGFCIFASVAPPIIFKGKSLTGILPAIDVLGDHALVGIFYFIGFGFFCLESLLSIWVIQQVYMYFRGSGKAAEMKRDAARQTMMAAL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0733 305 MobiDBLite consensus disorder prediction 1 69 - -
Glsi04g0733 305 Pfam SCAMP family 114 285 IPR007273 GO:0015031|GO:0016020
Glsi04g0733 305 MobiDBLite consensus disorder prediction 33 52 - -
Glsi04g0733 305 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 302 IPR007273 GO:0015031|GO:0016020
Glsi04g0733 305 Coils Coil 74 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0733 Glsi-ChrGlsi04 5156300 5161696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0733 3 305 Miscellaneous Gene Families AT1G11180 67.524 2.97e-147 413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1352 14 14356143 14362394 Glsi04g0733 04 5156300 5161696 CCT